Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:119198432-119362427

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc22a13 9 119192974 to 119209098 16124 - protein coding gene solute carrier family 22 (organic cation transporter), member 13
Tssr91976 9 119209096 to 119209109 13 - TSS region transcription start site region 91976
Slc22a13b 9 119220491 to 119231692 11201 - polymorphic pseudogene solute carrier family 22 (organic cation transporter), member 13b
Oxsr1 9 119238432 to 119322427 83995 - protein coding gene oxidative-stress responsive 1
Gm22729 9 119306629 to 119306757 128 - snoRNA gene predicted gene, 22729
Cpgi22470 9 119321545 to 119323392 1847 CpG island CpG island 22470
Tssr91977 9 119322330 to 119322358 28 - TSS region transcription start site region 91977
Tssr91978 9 119322376 to 119322417 41 - TSS region transcription start site region 91978
Tssr91979 9 119322421 to 119322449 28 - TSS region transcription start site region 91979
Tssr87671 9 119323047 to 119323064 17 + TSS region transcription start site region 87671
Tssr87672 9 119323139 to 119323153 14 + TSS region transcription start site region 87672
Myd88 9 119335988 to 119340040 4052 - protein coding gene myeloid differentiation primary response gene 88
Cpgi22471 9 119339527 to 119340210 683 CpG island CpG island 22471
Tssr87673 9 119339648 to 119339661 13 + TSS region transcription start site region 87673
Tssr91980 9 119339849 to 119339860 11 - TSS region transcription start site region 91980
Tssr91981 9 119339989 to 119340035 46 - TSS region transcription start site region 91981
Cpgi22472 9 119340898 to 119342030 1132 CpG island CpG island 22472
Acaa1a 9 119341052 to 119350296 9244 + protein coding gene acetyl-Coenzyme A acyltransferase 1A
Tssr87674 9 119341348 to 119341363 15 + TSS region transcription start site region 87674
Tssr87675 9 119341366 to 119341409 43 + TSS region transcription start site region 87675
Tssr91982 9 119341390 to 119341420 30 - TSS region transcription start site region 91982
Tssr87676 9 119341419 to 119341486 67 + TSS region transcription start site region 87676
Tssr87677 9 119341487 to 119341499 12 + TSS region transcription start site region 87677
Cpgi22473 9 119357343 to 119358187 844 CpG island CpG island 22473
Xylb 9 119357381 to 119393797 36416 + protein coding gene xylulokinase homolog (H. influenzae)
Tssr87678 9 119357543 to 119357564 21 + TSS region transcription start site region 87678
Tssr87679 9 119357574 to 119357604 30 + TSS region transcription start site region 87679