MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:118463851-118493866

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm33408	9	118447241 to 118478648	31407	-	lncRNA gene	predicted gene, 33408
Gm22479	9	118466984 to 118467064	80	-	snRNA gene	predicted gene, 22479
Tssr91956	9	118467061 to 118467065	4	-	TSS region	transcription start site region 91956
Cpgi22454	9	118476658 to 118477155	497		CpG island	CpG island 22454
Cpgi22455	9	118477448 to 118477941	493		CpG island	CpG island 22455
Tssr87627	9	118478182 to 118478199	17	+	TSS region	transcription start site region 87627
Eomes	9	118478212 to 118486132	7920	+	protein coding gene	eomesodermin
Cpgi22456	9	118478408 to 118479862	1454		CpG island	CpG island 22456
Tssr87628	9	118478447 to 118478451	4	+	TSS region	transcription start site region 87628
Tssr87629	9	118478624 to 118478635	11	+	TSS region	transcription start site region 87629
Tssr91957	9	118478722 to 118478736	14	-	TSS region	transcription start site region 91957
Tssr87630	9	118478815 to 118478824	9	+	TSS region	transcription start site region 87630
Tssr87631	9	118478851 to 118478866	15	+	TSS region	transcription start site region 87631
Tssr87632	9	118480578 to 118480591	13	+	TSS region	transcription start site region 87632
Tssr87633	9	118481265 to 118481287	22	+	TSS region	transcription start site region 87633
Tssr87634	9	118485145 to 118485170	25	+	TSS region	transcription start site region 87634
Gm33460	9	118486244 to 118489779	3535	-	antisense lncRNA gene	predicted gene, 33460
Cpgi22457	9	118486500 to 118486988	488		CpG island	CpG island 22457
Cpgi22458	9	118488081 to 118488383	302		CpG island	CpG island 22458