MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:116283770-116953816

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr87599	9	116314430 to 116314433	3	+	TSS region	transcription start site region 87599
D730003K21Rik	9	116327337 to 116339511	12174	+	lincRNA gene	RIKEN cDNA D730003K21 gene
Tssr91926	9	116366303 to 116366330	27	-	TSS region	transcription start site region 91926
Tssr87600	9	116370134 to 116370135	1	+	TSS region	transcription start site region 87600
Tssr91927	9	116384280 to 116384316	36	-	TSS region	transcription start site region 91927
Gm31559	9	116392889 to 116399481	6592	+	lncRNA gene	predicted gene, 31559
D9Dcr129	9	116518253 to 116518419	166		DNA segment	DNA segment, Chr 9, Derry C. Roopenian 129
D9Mit311	9	116518264 to 116518403	139		DNA segment	DNA Segment, Chr 9, Massachusetts Institute of Technology 311
Gm39449	9	116525131 to 116540406	15275	+	lncRNA gene	predicted gene, 39449
Rbms3	9	116572746 to 117629913	1057167	-	protein coding gene	RNA binding motif, single stranded interacting protein
Tssr91928	9	116612535 to 116612538	3	-	TSS region	transcription start site region 91928
Tssr91929	9	116618490 to 116618503	13	-	TSS region	transcription start site region 91929
Tssr91930	9	116618770 to 116618816	46	-	TSS region	transcription start site region 91930
Tssr91931	9	116673285 to 116673289	4	-	TSS region	transcription start site region 91931
Tssr91932	9	116715436 to 116715462	26	-	TSS region	transcription start site region 91932
Tssr91933	9	116860113 to 116860117	4	-	TSS region	transcription start site region 91933
Cpgi22448	9	116873261 to 116873574	313		CpG island	CpG island 22448