Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:115500136-116100240

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39447 9 115450495 to 115539794 89299 + lncRNA gene predicted gene, 39447
D9Mit150 9 115532481 to 115532593 112 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 150
Cpgi22443 9 115550908 to 115551233 325 CpG island CpG island 22443
D9Mit118 9 115604940 to 115605016 76 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 118
Tssr91910 9 115609742 to 115609746 4 - TSS region transcription start site region 91910
Tssr91911 9 115611764 to 115611775 11 - TSS region transcription start site region 91911
n-R5s92 9 115626600 to 115626718 118 - rRNA gene nuclear encoded rRNA 5S 92
Gm39448 9 115630571 to 115658857 28286 - lncRNA gene predicted gene, 39448
D9Mit117 9 115658261 to 115658485 224 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 117
D330037F02Rik 9 115665914 to 115674353 8439 + lncRNA gene RIKEN cDNA D330037F02 gene
Gm48007 9 115680743 to 115682263 1520 + lincRNA gene predicted gene, 48007
D9Dcr127 9 115718757 to 115718867 110 DNA segment DNA segment, Chr 9, Derry C. Roopenian 127
D9Dcr128 9 115800136 to 115800240 104 DNA segment DNA segment, Chr 9, Derry C. Roopenian 128
Tssr87593 9 115908472 to 115908497 25 + TSS region transcription start site region 87593
Gadl1 9 115909455 to 116076176 166721 + protein coding gene glutamate decarboxylase-like 1
Gm31234 9 115951107 to 115977967 26860 - lncRNA gene predicted gene, 31234
Cpgi22444 9 115954951 to 115955254 303 CpG island CpG island 22444
Gm16142 9 115990956 to 116001788 10832 - antisense lncRNA gene predicted gene 16142
Gm9385 9 116040593 to 116041064 471 - pseudogene predicted pseudogene 9385
Tssr91912 9 116041065 to 116041099 34 - TSS region transcription start site region 91912
4930465K12Rik 9 116047666 to 116050865 3199 unclassified gene RIKEN cDNA 4930465K12 gene
Gm31014 9 116051726 to 116054478 2752 - lncRNA gene predicted gene, 31014
Cpgi22445 9 116064785 to 116065126 341 CpG island CpG island 22445
D9Mit215 9 116072984 to 116073102 118 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 215
Gm18328 9 116079689 to 116080464 775 - pseudogene predicted gene, 18328
Cpgi22446 9 116084904 to 116085113 209 CpG island CpG island 22446
Tgfbr2 9 116087695 to 116175363 87668 - protein coding gene transforming growth factor, beta receptor II
Tssr91913 9 116089547 to 116089566 19 - TSS region transcription start site region 91913
Tssr91914 9 116090167 to 116090178 11 - TSS region transcription start site region 91914