Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:110544350-110704358

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Setd2 9 110532597 to 110618633 86036 + protein coding gene SET domain containing 2
Gm42763 9 110543211 to 110545297 2086 + unclassified gene predicted gene 42763
Tssr87395 9 110547126 to 110547137 11 + TSS region transcription start site region 87395
Tssr87396 9 110547671 to 110547708 37 + TSS region transcription start site region 87396
Nradd 9 110621135 to 110624393 3258 - protein coding gene neurotrophin receptor associated death domain
Tssr91637 9 110624350 to 110624358 8 - TSS region transcription start site region 91637
Tssr91638 9 110624361 to 110624439 78 - TSS region transcription start site region 91638
Cpgi22382 9 110624426 to 110625452 1026 CpG island CpG island 22382
Tssr87397 9 110624514 to 110624533 19 + TSS region transcription start site region 87397
Nbeal2 9 110624789 to 110654161 29372 - protein coding gene neurobeachin-like 2
Cpgi22383 9 110631381 to 110632327 946 CpG island CpG island 22383
Cpgi22384 9 110635230 to 110635566 336 CpG island CpG island 22384
Mir8107 9 110635999 to 110636115 116 - miRNA gene microRNA 8107
Tssr91639 9 110645295 to 110645302 7 - TSS region transcription start site region 91639
Tssr91640 9 110645306 to 110645320 14 - TSS region transcription start site region 91640
Tssr91641 9 110645328 to 110645354 26 - TSS region transcription start site region 91641
Cpgi22385 9 110653285 to 110654440 1155 CpG island CpG island 22385
Tssr91642 9 110653957 to 110654005 48 - TSS region transcription start site region 91642
Tssr91643 9 110654066 to 110654081 15 - TSS region transcription start site region 91643
Tssr91644 9 110654169 to 110654212 43 - TSS region transcription start site region 91644
Tssr91645 9 110654229 to 110654254 25 - TSS region transcription start site region 91645
Gm42470 9 110655679 to 110656455 776 + lincRNA gene predicted gene 42470
Cpgi22386 9 110656327 to 110656947 620 CpG island CpG island 22386
Tssr91646 9 110656382 to 110656419 37 - TSS region transcription start site region 91646
Tssr87398 9 110656466 to 110656477 11 + TSS region transcription start site region 87398
Tssr87399 9 110656494 to 110656544 50 + TSS region transcription start site region 87399
Ccdc12 9 110656503 to 110711593 55090 + protein coding gene coiled-coil domain containing 12
Tssr87400 9 110661689 to 110661694 5 + TSS region transcription start site region 87400
Tssr87401 9 110663690 to 110663694 4 + TSS region transcription start site region 87401
Tssr87402 9 110665433 to 110665442 9 + TSS region transcription start site region 87402
Gm35715 9 110669329 to 110674954 5625 - antisense lncRNA gene predicted gene, 35715
Tssr3034 9 110680218 to 110680219 1 - TSS region transcription start site region 3034
Tssr91647 9 110684128 to 110684140 12 - TSS region transcription start site region 91647
Tssr87403 9 110689442 to 110689463 21 + TSS region transcription start site region 87403