Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:108824043-108943049

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35025 9 108823938 to 108825098 1160 - lncRNA gene predicted gene, 35025
Cpgi22354 9 108824175 to 108824670 495 CpG island CpG island 22354
Tssr91557 9 108824814 to 108824855 41 - TSS region transcription start site region 91557
Cpgi22355 9 108824852 to 108825449 597 CpG island CpG island 22355
Gm37714 9 108825349 to 108825690 341 + unclassified gene predicted gene, 37714
Cpgi22356 9 108825751 to 108828234 2483 CpG island CpG island 22356
Tssr87164 9 108826026 to 108826074 48 + TSS region transcription start site region 87164
Celsr3 9 108826320 to 108852969 26649 + protein coding gene cadherin, EGF LAG seven-pass G-type receptor 3
Cpgi22357 9 108831616 to 108833221 1605 CpG island CpG island 22357
Tssr3013 9 108831824 to 108831881 57 + TSS region transcription start site region 3013
Cpgi22358 9 108842914 to 108843267 353 CpG island CpG island 22358
Gm23156 9 108844478 to 108844563 85 + miRNA gene predicted gene, 23156
Cpgi22359 9 108853833 to 108854755 922 CpG island CpG island 22359
Tssr87165 9 108854024 to 108854065 41 + TSS region transcription start site region 87165
Slc26a6 9 108854043 to 108913049 59006 + protein coding gene solute carrier family 26, member 6
Tssr87166 9 108854069 to 108854084 15 + TSS region transcription start site region 87166
Tssr87167 9 108854089 to 108854110 21 + TSS region transcription start site region 87167
Tssr91558 9 108854560 to 108854571 11 - TSS region transcription start site region 91558
Tssr91559 9 108854575 to 108854600 25 - TSS region transcription start site region 91559
Tssr87168 9 108854686 to 108854706 20 + TSS region transcription start site region 87168
Tssr87169 9 108854711 to 108854738 27 + TSS region transcription start site region 87169
Tssr91560 9 108855295 to 108855312 17 - TSS region transcription start site region 91560
Tssr87170 9 108855530 to 108855537 7 + TSS region transcription start site region 87170
Tssr87171 9 108855614 to 108855648 34 + TSS region transcription start site region 87171
Tssr87172 9 108914598 to 108914611 13 + TSS region transcription start site region 87172
Tmem89 9 108914619 to 108915563 944 + protein coding gene transmembrane protein 89
Tssr87173 9 108914622 to 108914635 13 + TSS region transcription start site region 87173
Tssr87174 9 108914650 to 108914657 7 + TSS region transcription start site region 87174
Adip20d 9 108915010 to 118915010 10000000 QTL adiposity 20d
Tssr87175 9 108926604 to 108926624 20 + TSS region transcription start site region 87175
Cpgi22360 9 108936370 to 108937347 977 CpG island CpG island 22360
Uqcrc1 9 108936633 to 108949623 12990 + protein coding gene ubiquinol-cytochrome c reductase core protein 1
Tssr87176 9 108936685 to 108936715 30 + TSS region transcription start site region 87176
Tssr87177 9 108937040 to 108937060 20 + TSS region transcription start site region 87177
Tssr91561 9 108937170 to 108937182 12 - TSS region transcription start site region 91561
Tssr91562 9 108937189 to 108937218 29 - TSS region transcription start site region 91562