Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:107873469-107987461

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi22311 9 107887901 to 107888448 547 CpG island CpG island 22311
Tssr87027 9 107888136 to 107888211 75 + TSS region transcription start site region 87027
Mon1a 9 107888151 to 107903139 14988 + protein coding gene MON1 homolog A, secretory traffciking associated
D9Dcr103 9 107891731 to 107891832 101 DNA segment DNA segment, Chr 9, Derry C. Roopenian 103
Cpgi22312 9 107901132 to 107901935 803 CpG island CpG island 22312
Gm23856 9 107905228 to 107905326 98 + snRNA gene predicted gene, 23856
Cpgi22313 9 107906800 to 107907427 627 CpG island CpG island 22313
Tssr87028 9 107906866 to 107906918 52 + TSS region transcription start site region 87028
Mst1r 9 107906873 to 107920383 13510 + protein coding gene macrophage stimulating 1 receptor (c-met-related tyrosine kinase)
Tssr87029 9 107912568 to 107912574 6 + TSS region transcription start site region 87029
Tssr87030 9 107914975 to 107915008 33 + TSS region transcription start site region 87030
Ltw3 9 107920383 to 86581363 -21339020 heritable phenotypic marker liver 20-30 thousand Mol. Wt. protein 3
Tssr87031 9 107928438 to 107928439 1 + TSS region transcription start site region 87031
Tssr87032 9 107928440 to 107928483 43 + TSS region transcription start site region 87032
Actl11 9 107928469 to 107932461 3992 + protein coding gene actin-like 11
Tssr87033 9 107928622 to 107928663 41 + TSS region transcription start site region 87033
Tssr87034 9 107928715 to 107928726 11 + TSS region transcription start site region 87034
Gm37974 9 107935077 to 107936394 1317 - antisense lncRNA gene predicted gene, 37974
Cpgi22314 9 107935522 to 107936723 1201 CpG island CpG island 22314
0710008F09Rik 9 107935673 to 107936144 471 unclassified gene RIKEN cDNA 0710008F09 gene
Tssr87035 9 107935876 to 107935938 62 + TSS region transcription start site region 87035
Camkv 9 107935920 to 107949691 13771 + protein coding gene CaM kinase-like vesicle-associated
Cpgi22315 9 107950703 to 107951374 671 CpG island CpG island 22315
Tssr87036 9 107950952 to 107950991 39 + TSS region transcription start site region 87036
Traip 9 107950963 to 107972268 21305 + protein coding gene TRAF-interacting protein
Tssr87037 9 107961504 to 107961507 3 + TSS region transcription start site region 87037
Tssr87038 9 107972100 to 107972114 14 + TSS region transcription start site region 87038
Tssr87039 9 107975496 to 107975510 14 + TSS region transcription start site region 87039
Tssr87040 9 107975529 to 107975601 72 + TSS region transcription start site region 87040
Uba7 9 107975567 to 107984056 8489 + protein coding gene ubiquitin-like modifier activating enzyme 7
Tssr87041 9 107975610 to 107975621 11 + TSS region transcription start site region 87041
Tssr87042 9 107975622 to 107975631 9 + TSS region transcription start site region 87042
Tssr87043 9 107975643 to 107975648 5 + TSS region transcription start site region 87043
Tssr87044 9 107975652 to 107975660 8 + TSS region transcription start site region 87044
Tssr87045 9 107976903 to 107976914 11 + TSS region transcription start site region 87045
Tssr87046 9 107982969 to 107982989 20 + TSS region transcription start site region 87046
Tssr87047 9 107982991 to 107983037 46 + TSS region transcription start site region 87047
Tssr87048 9 107983039 to 107983066 27 + TSS region transcription start site region 87048
Gm20661 9 107983058 to 107995007 11949 + protein coding gene predicted gene 20661
Inka1 9 107984223 to 107985879 1656 - protein coding gene inka box actin regulator 1
Cpgi22316 9 107985212 to 107986566 1354 CpG island CpG island 22316
Tssr91479 9 107985863 to 107985893 30 - TSS region transcription start site region 91479
Tssr91480 9 107985907 to 107985924 17 - TSS region transcription start site region 91480
Gm24944 9 107987369 to 107987496 127 + snoRNA gene predicted gene, 24944