Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:107682808-107843587

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sema3f 9 107681500 to 107710475 28975 - protein coding gene sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
Cpgi22306 9 107685335 to 107685596 261 CpG island CpG island 22306
Cpgi22307 9 107690499 to 107690650 151 CpG island CpG island 22307
Cpgi22308 9 107708913 to 107710831 1918 CpG island CpG island 22308
Tssr91467 9 107709643 to 107709681 38 - TSS region transcription start site region 91467
Tssr91468 9 107709896 to 107709994 98 - TSS region transcription start site region 91468
Tssr87025 9 107729518 to 107729527 9 + TSS region transcription start site region 87025
Gm34605 9 107729972 to 107736933 6961 + lncRNA gene predicted gene, 34605
Rbm5 9 107740495 to 107771009 30514 - protein coding gene RNA binding motif protein 5
Tssr91469 9 107757532 to 107757535 3 - TSS region transcription start site region 91469
Gm37850 9 107762808 to 107763587 779 + antisense lncRNA gene predicted gene, 37850
Tssr91470 9 107769622 to 107769626 4 - TSS region transcription start site region 91470
Cpgi22309 9 107770308 to 107771264 956 CpG island CpG island 22309
Tssr91471 9 107770951 to 107771007 56 - TSS region transcription start site region 91471
Rbm6 9 107773559 to 107872822 99263 - protein coding gene RNA binding motif protein 6
Tssr91472 9 107815960 to 107815965 5 - TSS region transcription start site region 91472
Tssr91473 9 107818064 to 107818080 16 - TSS region transcription start site region 91473
Gm37436 9 107818928 to 107820012 1084 - unclassified gene predicted gene, 37436
D9Ertd292e 9 107841883 to 107842127 244 DNA segment DNA segment, Chr 9, ERATO Doi 292, expressed