Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:106543645-106663743

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Iqcf3 9 106504665 to 106561631 56966 - protein coding gene IQ motif containing F3
Tssr91327 9 106544683 to 106544688 5 - TSS region transcription start site region 91327
Tssr91328 9 106550238 to 106550251 13 - TSS region transcription start site region 91328
Tssr91329 9 106550260 to 106550261 1 - TSS region transcription start site region 91329
D9Mit78 9 106553293 to 106553417 124 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 78
D9Dcr90 9 106553313 to 106553408 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 90
Tssr91330 9 106561617 to 106561636 19 - TSS region transcription start site region 91330
Tssr3006 9 106561649 to 106561653 4 - TSS region transcription start site region 3006
Tssr86929 9 106561712 to 106561718 6 + TSS region transcription start site region 86929
Tssr86930 9 106561746 to 106561753 7 + TSS region transcription start site region 86930
Iqcf4 9 106568319 to 106570967 2648 - protein coding gene IQ motif containing F4
Tssr91331 9 106570983 to 106571005 22 - TSS region transcription start site region 91331
Gm39420 9 106577639 to 106626384 48745 - lncRNA gene predicted gene, 39420
Gm39421 9 106580271 to 106583783 3512 + lncRNA gene predicted gene, 39421
D9Dcr91 9 106603645 to 106603743 98 DNA segment DNA segment, Chr 9, Derry C. Roopenian 91
D9Dcr92 9 106618512 to 106618607 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 92
D9Mit79 9 106622185 to 106622411 226 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 79
Iqcf6 9 106626582 to 106627675 1093 + protein coding gene IQ motif containing F6
Tssr86931 9 106626599 to 106626613 14 + TSS region transcription start site region 86931
Gm26185 9 106636318 to 106636583 265 + unclassified non-coding RNA gene predicted gene, 26185
Gm28111 9 106640928 to 106643564 2636 + antisense lncRNA gene predicted gene 28111
Grm2 9 106644534 to 106656109 11575 - protein coding gene glutamate receptor, metabotropic 2
Cpgi22271 9 106647095 to 106648212 1117 CpG island CpG island 22271
Cpgi22272 9 106650422 to 106651188 766 CpG island CpG island 22272
Cpgi22273 9 106655603 to 106656449 846 CpG island CpG island 22273
Tssr91332 9 106656081 to 106656096 15 - TSS region transcription start site region 91332
Tssr86932 9 106656402 to 106656403 1 + TSS region transcription start site region 86932
Tex264 9 106658746 to 106685927 27181 - protein coding gene testis expressed gene 264
Tssr91333 9 106663246 to 106663270 24 - TSS region transcription start site region 91333