Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:105558402-105758426

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D9Dcr77 9 105558742 to 105558855 113 DNA segment DNA segment, Chr 9, Derry C. Roopenian 77
Gm5621 9 105560122 to 105560761 639 - pseudogene predicted gene 5621
Tssr91262 9 105560804 to 105560813 9 - TSS region transcription start site region 91262
D9Dcr78 9 105564625 to 105564721 96 DNA segment DNA segment, Chr 9, Derry C. Roopenian 78
D9Dcr79 9 105570807 to 105570911 104 DNA segment DNA segment, Chr 9, Derry C. Roopenian 79
D9Dcr80 9 105578168 to 105578270 102 DNA segment DNA segment, Chr 9, Derry C. Roopenian 80
D9Dcr81 9 105631493 to 105631589 96 DNA segment DNA segment, Chr 9, Derry C. Roopenian 81
Cpgi22247 9 105642821 to 105643328 507 CpG island CpG island 22247
Tssr86844 9 105642957 to 105643036 79 + TSS region transcription start site region 86844
Pik3r4 9 105642995 to 105687655 44660 + protein coding gene phosphoinositide-3-kinase regulatory subunit 4
D9Dcr82 9 105645533 to 105645642 109 DNA segment DNA segment, Chr 9, Derry C. Roopenian 82
Tssr86845 9 105658386 to 105658391 5 + TSS region transcription start site region 86845
Tssr86846 9 105658402 to 105658426 24 + TSS region transcription start site region 86846
Tssr86847 9 105658435 to 105658456 21 + TSS region transcription start site region 86847
Tssr86848 9 105658479 to 105658489 10 + TSS region transcription start site region 86848
Tssr86849 9 105658498 to 105658505 7 + TSS region transcription start site region 86849
Gm22720 9 105673465 to 105673551 86 - snRNA gene predicted gene, 22720
D9Dcr83 9 105689181 to 105689283 102 DNA segment DNA segment, Chr 9, Derry C. Roopenian 83
Col6a6 9 105689417 to 105828245 138828 - protein coding gene collagen, type VI, alpha 6
D9Dcr84 9 105692473 to 105692579 106 DNA segment DNA segment, Chr 9, Derry C. Roopenian 84
D9Dcr85 9 105701768 to 105701878 110 DNA segment DNA segment, Chr 9, Derry C. Roopenian 85
D9Dcr86 9 105714929 to 105715022 93 DNA segment DNA segment, Chr 9, Derry C. Roopenian 86
D430039P05Rik 9 105720739 to 105722839 2100 unclassified gene RIKEN cDNA D430039P05 gene
Gm38314 9 105727785 to 105728409 624 + unclassified gene predicted gene, 38314