Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:104954777-105178021

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpne4 9 104566665 to 105034548 467883 + protein coding gene copine IV
D9Dcr61 9 104984625 to 104984729 104 DNA segment DNA segment, Chr 9, Derry C. Roopenian 61
D9Dcr62 9 104994332 to 104994427 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 62
Gm23391 9 104994916 to 104995019 103 + miRNA gene predicted gene, 23391
D9Dcr63 9 105011298 to 105011394 96 DNA segment DNA segment, Chr 9, Derry C. Roopenian 63
Tssr86830 9 105018368 to 105018378 10 + TSS region transcription start site region 86830
Tssr86831 9 105018400 to 105018408 8 + TSS region transcription start site region 86831
Cpgi22243 9 105053156 to 105053561 405 CpG island CpG island 22243
Tssr86832 9 105053248 to 105053259 11 + TSS region transcription start site region 86832
Tssr86833 9 105053260 to 105053303 43 + TSS region transcription start site region 86833
Mrpl3 9 105053268 to 105077476 24208 + protein coding gene mitochondrial ribosomal protein L3
Gm38077 9 105064777 to 105068021 3244 + unclassified gene predicted gene, 38077
Gm47106 9 105064805 to 105088286 23481 - antisense lncRNA gene predicted gene, 47106
Gm47103 9 105085920 to 105087030 1110 + pseudogene predicted gene, 47103
Gm47102 9 105087075 to 105090181 3106 + pseudogene predicted gene, 47102
D9Mit80 9 105096928 to 105097075 147 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 80
Nudt16 9 105129332 to 105131843 2511 - protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 16
Cpgi22244 9 105131158 to 105132202 1044 CpG island CpG island 22244
Tssr91247 9 105131775 to 105131833 58 - TSS region transcription start site region 91247
D9Mit321 9 105137755 to 105137954 199 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology-321
D9Dcr64 9 105141341 to 105141436 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 64
Nudt16l2 9 105143344 to 105145082 1738 - protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 2
Tssr91248 9 105145011 to 105145014 3 - TSS region transcription start site region 91248
Tssr91249 9 105145072 to 105145106 34 - TSS region transcription start site region 91249
Nek11 9 105162156 to 105395524 233368 - protein coding gene NIMA (never in mitosis gene a)-related expressed kinase 11
Gm37582 9 105163125 to 105164533 1408 + unclassified gene predicted gene, 37582