Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:104889332-105099427

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpne4 9 104566665 to 105034548 467883 + protein coding gene copine IV
D9Dcr58 9 104899515 to 104899614 99 DNA segment DNA segment, Chr 9, Derry C. Roopenian 58
D9Dcr59 9 104905575 to 104905674 99 DNA segment DNA segment, Chr 9, Derry C. Roopenian 59
D9Dcr60 9 104951347 to 104951442 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 60
D9Dcr61 9 104984625 to 104984729 104 DNA segment DNA segment, Chr 9, Derry C. Roopenian 61
D9Dcr62 9 104994332 to 104994427 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 62
Gm23391 9 104994916 to 104995019 103 + miRNA gene predicted gene, 23391
D9Dcr63 9 105011298 to 105011394 96 DNA segment DNA segment, Chr 9, Derry C. Roopenian 63
Tssr86830 9 105018368 to 105018378 10 + TSS region transcription start site region 86830
Tssr86831 9 105018400 to 105018408 8 + TSS region transcription start site region 86831
Cpgi22243 9 105053156 to 105053561 405 CpG island CpG island 22243
Tssr86832 9 105053248 to 105053259 11 + TSS region transcription start site region 86832
Tssr86833 9 105053260 to 105053303 43 + TSS region transcription start site region 86833
Mrpl3 9 105053268 to 105077476 24208 + protein coding gene mitochondrial ribosomal protein L3
Gm38077 9 105064777 to 105068021 3244 + unclassified gene predicted gene, 38077
Gm47106 9 105064805 to 105088286 23481 - antisense lncRNA gene predicted gene, 47106
Gm47103 9 105085920 to 105087030 1110 + pseudogene predicted gene, 47103
Gm47102 9 105087075 to 105090181 3106 + pseudogene predicted gene, 47102
D9Mit80 9 105096928 to 105097075 147 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 80