Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:104346733-104786745

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr86814 9 104355958 to 104356003 45 + TSS region transcription start site region 86814
Tssr86815 9 104361829 to 104361833 4 + TSS region transcription start site region 86815
Gm28548 9 104361832 to 104385031 23199 + lincRNA gene predicted gene 28548
Tssr86816 9 104361836 to 104361846 10 + TSS region transcription start site region 86816
Tssr86817 9 104361893 to 104361899 6 + TSS region transcription start site region 86817
n-TCgca47 9 104400120 to 104400191 71 + tRNA gene nuclear encoded tRNA cysteine 47 (anticodon GCA)
n-TCgca53 9 104404056 to 104404127 71 + tRNA gene nuclear encoded tRNA cysteine 53 (anticodon GCA)
n-TEttc8 9 104408667 to 104408738 71 - tRNA gene nuclear encoded tRNA glutamic acid 8 (anticodon TTC)
Cpgi22241 9 104409159 to 104409343 184 CpG island CpG island 22241
Mir2136 9 104426113 to 104426187 74 + miRNA gene microRNA 2136
D9Mit77 9 104427138 to 104427315 177 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 77
Gm25904 9 104481368 to 104481510 142 - snoRNA gene predicted gene, 25904
Tssr86818 9 104547267 to 104547295 28 + TSS region transcription start site region 86818
Cpne4 9 104566665 to 105034548 467883 + protein coding gene copine IV
Tssr86819 9 104566695 to 104566706 11 + TSS region transcription start site region 86819
Tssr86820 9 104566733 to 104566745 12 + TSS region transcription start site region 86820
Tssr86821 9 104566768 to 104566773 5 + TSS region transcription start site region 86821
Cpgi22242 9 104569463 to 104569673 210 CpG island CpG island 22242
Tssr86822 9 104569601 to 104569631 30 + TSS region transcription start site region 86822
Tssr86823 9 104569633 to 104569665 32 + TSS region transcription start site region 86823
Tssr86824 9 104569672 to 104569683 11 + TSS region transcription start site region 86824
Tssr86825 9 104569735 to 104569746 11 + TSS region transcription start site region 86825
Tssr86826 9 104569754 to 104569793 39 + TSS region transcription start site region 86826
Tssr86827 9 104569795 to 104569800 5 + TSS region transcription start site region 86827
Tssr86828 9 104588051 to 104588075 24 + TSS region transcription start site region 86828
D9Dcr55 9 104595465 to 104595564 99 DNA segment DNA segment, Chr 9, Derry C. Roopenian 55
Tssr2999 9 104727896 to 104727898 2 + TSS region transcription start site region 2999
D9Mit53 9 104782282 to 104782493 211 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 53
D9Dcr56 9 104782400 to 104782504 104 DNA segment DNA segment, Chr 9, Derry C. Roopenian 56
dcr 9 104782400 to 105554952 772552 heritable phenotypic marker decrepit