Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:103228238-103348496

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20425 9 103190208 to 103230307 40099 - protein coding gene predicted gene 20425
Trf 9 103208876 to 103230286 21410 - protein coding gene transferrin
Tssr91181 9 103228420 to 103228437 17 - TSS region transcription start site region 91181
Tssr91182 9 103228450 to 103228457 7 - TSS region transcription start site region 91182
Cpgi22233 9 103230137 to 103230438 301 CpG island CpG island 22233
Tssr91183 9 103230262 to 103230280 18 - TSS region transcription start site region 91183
Tssr91184 9 103230296 to 103230309 13 - TSS region transcription start site region 91184
D9Mit24 9 103230401 to 103230530 129 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 24
Bbaa17 9 103230401 to 103230530 129 QTL B.burgdorferi-associated arthritis 17
Tssr91185 9 103230415 to 103230430 15 - TSS region transcription start site region 91185
1300017J02Rik 9 103250523 to 103288297 37774 - protein coding gene RIKEN cDNA 1300017J02 gene
D9Mit347 9 103257298 to 103257420 122 DNA segment DNA Segment, Chr 9 Massachusetts Institute of Technology 347
Tssr91186 9 103259494 to 103259518 24 - TSS region transcription start site region 91186
Gm31701 9 103260343 to 103265874 5531 + lncRNA gene predicted gene, 31701
D9Mgc21 9 103288081 to 103288378 297 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 21
Tssr91187 9 103288225 to 103288256 31 - TSS region transcription start site region 91187
D9Mgc23 9 103288238 to 103288496 258 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 23
Tssr91188 9 103288270 to 103288281 11 - TSS region transcription start site region 91188
Tssr91189 9 103288290 to 103288307 17 - TSS region transcription start site region 91189
Cpgi22234 9 103304803 to 103305735 932 CpG island CpG island 22234
Tssr91190 9 103305049 to 103305084 35 - TSS region transcription start site region 91190
Tssr86783 9 103305156 to 103305255 99 + TSS region transcription start site region 86783
Topbp1 9 103305215 to 103350428 45213 + protein coding gene topoisomerase (DNA) II binding protein 1
D9Mgc20 9 103327954 to 103328210 256 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 20
Tssr86784 9 103331176 to 103331180 4 + TSS region transcription start site region 86784
Tssr91191 9 103347720 to 103347724 4 - TSS region transcription start site region 91191