Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:102664864-103004947

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D9Dcr41 9 102665601 to 102665699 98 DNA segment DNA segment, Chr 9, Derry C. Roopenian 41
Gm46150 9 102668957 to 102683813 14856 - lncRNA gene predicted gene, 46150
Cpgi22223 9 102689763 to 102690602 839 CpG island CpG island 22223
Tssr86728 9 102690671 to 102690693 22 + TSS region transcription start site region 86728
Tssr86729 9 102690733 to 102690755 22 + TSS region transcription start site region 86729
4930533D04Rik 9 102692885 to 102693834 949 + lincRNA gene RIKEN cDNA 4930533D04 gene
Tssr86730 9 102694349 to 102694354 5 + TSS region transcription start site region 86730
Gm36957 9 102698179 to 102701002 2823 - unclassified gene predicted gene, 36957
Tssr86731 9 102716692 to 102716704 12 + TSS region transcription start site region 86731
Cpgi22224 9 102717218 to 102718975 1757 CpG island CpG island 22224
Tssr86732 9 102717277 to 102717303 26 + TSS region transcription start site region 86732
Amotl2 9 102717294 to 102733418 16124 + protein coding gene angiomotin-like 2
Tssr91134 9 102717557 to 102717581 24 - TSS region transcription start site region 91134
Tssr86733 9 102717692 to 102717697 5 + TSS region transcription start site region 86733
Tssr86734 9 102717717 to 102717730 13 + TSS region transcription start site region 86734
Tssr86735 9 102717732 to 102717745 13 + TSS region transcription start site region 86735
Tssr86736 9 102717796 to 102717815 19 + TSS region transcription start site region 86736
Tssr86737 9 102718424 to 102718490 66 + TSS region transcription start site region 86737
Tssr86738 9 102720088 to 102720099 11 + TSS region transcription start site region 86738
Tssr86739 9 102720323 to 102720336 13 + TSS region transcription start site region 86739
Cpgi22225 9 102726385 to 102726659 274 CpG island CpG island 22225
Gm5627 9 102739648 to 102756685 17037 + lincRNA gene predicted gene 5627
D9Mgc14 9 102750452 to 102750601 149 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 14
Gm36958 9 102764635 to 102766509 1874 - unclassified gene predicted gene, 36958
Gm47416 9 102771495 to 102790260 18765 + lincRNA gene predicted gene, 47416
Gm46151 9 102775104 to 102778608 3504 - lncRNA gene predicted gene, 46151
Tssr2995 9 102819769 to 102819799 30 + TSS region transcription start site region 2995
Gm18655 9 102819861 to 102820940 1079 - pseudogene predicted gene, 18655
Cpgi22226 9 102834471 to 102835751 1280 CpG island CpG island 22226
Tssr86740 9 102834864 to 102834947 83 + TSS region transcription start site region 86740
Ryk 9 102834920 to 102908307 73387 + protein coding gene receptor-like tyrosine kinase
Tssr86741 9 102834961 to 102834972 11 + TSS region transcription start site region 86741
Tssr86742 9 102834979 to 102834990 11 + TSS region transcription start site region 86742
Gm47427 9 102851835 to 102852473 638 + unclassified gene predicted gene, 47427
Tssr86743 9 102864512 to 102864523 11 + TSS region transcription start site region 86743
Tssr86744 9 102900203 to 102900210 7 + TSS region transcription start site region 86744
D9Dcr42 9 102922092 to 102922187 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 42
D9Mgc24 9 102977703 to 102977807 104 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 24
Tssr86745 9 102988746 to 102988752 6 + TSS region transcription start site region 86745
Tssr86746 9 102988757 to 102988788 31 + TSS region transcription start site region 86746
Gm31434 9 102989619 to 103002227 12608 - lncRNA gene predicted gene, 31434
Gm25842 9 102991895 to 102992216 321 + unclassified non-coding RNA gene predicted gene, 25842