Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:89241429-90311432

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Char2a 8 71136783 to 90202598 19065815 QTL P. chabaudi malaria resistance QTL 2a
Cpgi20801 8 89272345 to 89272821 476 CpG island CpG island 20801
D8Mit50 8 89351668 to 89351811 143 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 50
Tssr2638 8 89427219 to 89427246 27 + TSS region transcription start site region 2638
Gm35593 8 89427227 to 89462515 35288 + lncRNA gene predicted gene, 35593
Cpgi20802 8 89571948 to 89572114 166 CpG island CpG island 20802
Tssr2639 8 89580206 to 89580209 3 + TSS region transcription start site region 2639
Gm26331 8 89589435 to 89589541 106 - snRNA gene predicted gene, 26331
Gm24212 8 89667173 to 89667304 131 - snoRNA gene predicted gene, 24212
D8Mit307 8 89691871 to 89691948 77 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 307
Tssr78681 8 89776429 to 89776432 3 + TSS region transcription start site region 78681
Tssr82392 8 89824661 to 89824674 13 - TSS region transcription start site region 82392
Tssr78682 8 89995914 to 89995918 4 + TSS region transcription start site region 78682
D8Mit197 8 90024955 to 90025070 115 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 197
D8Mit308 8 90108164 to 90108272 108 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 308
D8Mit266 8 90202495 to 90202598 103 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 266
Pitm3 8 90202495 to 90202598 103 QTL prion incubation time 3
D8Mit107 8 90236541 to 90236690 149 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 107
Tox3 8 90247040 to 90348343 101303 - protein coding gene TOX high mobility group box family member 3
Tssr82393 8 90298404 to 90298409 5 - TSS region transcription start site region 82393
Tssr82394 8 90301362 to 90301366 4 - TSS region transcription start site region 82394