Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:85100567-85340593

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp791 8 85108553 to 85123095 14542 - protein coding gene zinc finger protein 791
Cpgi20756 8 85109922 to 85110517 595 CpG island CpG island 20756
Gm23388 8 85112012 to 85112068 56 - miRNA gene predicted gene, 23388
Tssr82246 8 85112110 to 85112120 10 - TSS region transcription start site region 82246
Cpgi20757 8 85119351 to 85119751 400 CpG island CpG island 20757
Tssr82247 8 85119679 to 85119694 15 - TSS region transcription start site region 82247
Gm45317 8 85122728 to 85122950 222 + pseudogene predicted gene 45317
Gm42031 8 85126736 to 85128627 1891 - lincRNA gene predicted gene, 42031
Gm45316 8 85135765 to 85135926 161 + pseudogene predicted gene 45316
Cks1brt 8 85151924 to 85173622 21698 + protein coding gene CDC28 protein kinase 1b, retrogene
Gm33296 8 85152065 to 85159145 7080 - lncRNA gene predicted gene, 33296
Gm18137 8 85154218 to 85154923 705 - pseudogene predicted gene, 18137
Tssr78544 8 85171523 to 85171526 3 + TSS region transcription start site region 78544
Tssr82248 8 85220567 to 85220593 26 - TSS region transcription start site region 82248
Tssr78545 8 85221481 to 85221486 5 + TSS region transcription start site region 78545
Olfr371 8 85230497 to 85231435 938 + protein coding gene olfactory receptor 371
Vps35 8 85260392 to 85299497 39105 - protein coding gene VPS35 retromer complex component
Tssr82249 8 85261077 to 85261092 15 - TSS region transcription start site region 82249
Tssr82250 8 85286395 to 85286416 21 - TSS region transcription start site region 82250
Cpgi20758 8 85298728 to 85300241 1513 CpG island CpG island 20758
Tssr82251 8 85299483 to 85299535 52 - TSS region transcription start site region 82251
Orc6 8 85299632 to 85308278 8646 + protein coding gene origin recognition complex, subunit 6
Tssr78546 8 85299645 to 85299667 22 + TSS region transcription start site region 78546
Tssr78547 8 85299696 to 85299706 10 + TSS region transcription start site region 78547
Tssr82252 8 85299756 to 85299791 35 - TSS region transcription start site region 82252
Tssr78548 8 85299892 to 85299928 36 + TSS region transcription start site region 78548
Gm22336 8 85315140 to 85315246 106 + snRNA gene predicted gene, 22336
Mylk3 8 85324304 to 85386340 62036 - protein coding gene myosin light chain kinase 3
Tssr82253 8 85328014 to 85328019 5 - TSS region transcription start site region 82253
Tssr82254 8 85336398 to 85336442 44 - TSS region transcription start site region 82254
AA672651 8 85339343 to 85340272 929 + antisense lncRNA gene expressed sequence AA672651