MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:84845673-84865675

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Calr	8	84842088 to 84846931	4843	-	protein coding gene	calreticulin
Cpgi20723	8	84845882 to 84847511	1629		CpG island	CpG island 20723
Tssr82195	8	84845924 to 84845947	23	-	TSS region	transcription start site region 82195
Tssr82196	8	84845953 to 84845962	9	-	TSS region	transcription start site region 82196
Tssr2629	8	84846242 to 84846265	23	+	TSS region	transcription start site region 2629
Tssr82197	8	84846322 to 84846334	12	-	TSS region	transcription start site region 82197
Tssr82198	8	84846613 to 84846622	9	-	TSS region	transcription start site region 82198
Tssr82199	8	84846860 to 84846872	12	-	TSS region	transcription start site region 82199
Tssr82200	8	84847003 to 84847038	35	-	TSS region	transcription start site region 82200
1700122E12Rik	8	84847188 to 84848415	1227	+	lncRNA gene	RIKEN cDNA 1700122E12 gene
Tssr78450	8	84847223 to 84847234	11	+	TSS region	transcription start site region 78450
Tssr78451	8	84847237 to 84847250	13	+	TSS region	transcription start site region 78451
D8Mit105	8	84850996 to 84851117	121		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 105
Gm5911	8	84853959 to 84854609	650	-	pseudogene	predicted gene 5911
Tssr82201	8	84855673 to 84855675	2	-	TSS region	transcription start site region 82201
Cpgi20724	8	84856798 to 84857481	683		CpG island	CpG island 20724
Tssr78452	8	84856982 to 84857036	54	+	TSS region	transcription start site region 78452
Farsa	8	84856989 to 84869257	12268	+	protein coding gene	phenylalanyl-tRNA synthetase, alpha subunit