Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:84551420-84651440

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cacna1a 8 84388440 to 84640246 251806 + protein coding gene calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
Cpgi20693 8 84558863 to 84560034 1171 CpG island CpG island 20693
Tssr2626 8 84559030 to 84559039 9 + TSS region transcription start site region 2626
Cpgi20694 8 84566047 to 84566460 413 CpG island CpG island 20694
Cpgi20695 8 84567672 to 84567936 264 CpG island CpG island 20695
Cpgi20696 8 84569831 to 84570143 312 CpG island CpG island 20696
Gm32854 8 84583040 to 84588733 5693 - lncRNA gene predicted gene, 32854
Tssr82100 8 84587602 to 84587621 19 - TSS region transcription start site region 82100
Tssr82101 8 84587622 to 84587633 11 - TSS region transcription start site region 82101
Tssr78402 8 84589667 to 84589678 11 + TSS region transcription start site region 78402
Tssr78403 8 84597113 to 84597150 37 + TSS region transcription start site region 78403
Tssr78404 8 84597869 to 84597890 21 + TSS region transcription start site region 78404
Tssr78405 8 84597907 to 84597920 13 + TSS region transcription start site region 78405
Cpgi20697 8 84600581 to 84600903 322 CpG island CpG island 20697
Tssr78406 8 84601360 to 84601377 17 + TSS region transcription start site region 78406
Tssr78407 8 84601420 to 84601440 20 + TSS region transcription start site region 78407
Tssr78408 8 84601463 to 84601477 14 + TSS region transcription start site region 78408
Cpgi20698 8 84601549 to 84602147 598 CpG island CpG island 20698
Gm16183 8 84611202 to 84617184 5982 - antisense lncRNA gene predicted gene 16183
Tssr78409 8 84615483 to 84615499 16 + TSS region transcription start site region 78409
Cpgi20699 8 84617033 to 84617364 331 CpG island CpG island 20699
Tssr78410 8 84623636 to 84623686 50 + TSS region transcription start site region 78410
Gm39212 8 84624087 to 84639255 15168 - lncRNA gene predicted gene, 39212
Tssr78411 8 84636340 to 84636390 50 + TSS region transcription start site region 78411
Tssr78412 8 84636398 to 84636417 19 + TSS region transcription start site region 78412
Cpgi20700 8 84638494 to 84639964 1470 CpG island CpG island 20700
Tssr78413 8 84638519 to 84638537 18 + TSS region transcription start site region 78413
Tssr78414 8 84638538 to 84638592 54 + TSS region transcription start site region 78414
Tssr78415 8 84638596 to 84638611 15 + TSS region transcription start site region 78415
Tssr78416 8 84638750 to 84638776 26 + TSS region transcription start site region 78416
Tssr82102 8 84638883 to 84638901 18 - TSS region transcription start site region 82102
Tssr78417 8 84638962 to 84639017 55 + TSS region transcription start site region 78417
Gm39211 8 84642119 to 84643273 1154 + lncRNA gene predicted gene, 39211
Tssr82103 8 84642840 to 84642848 8 - TSS region transcription start site region 82103
Tssr78418 8 84650365 to 84650373 8 + TSS region transcription start site region 78418