MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:83612651-83692667

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dnajb1	8	83608193 to 83612653	4460	+	protein coding gene	DnaJ heat shock protein family (Hsp40) member B1
Cpgi20648	8	83622249 to 83622589	340		CpG island	CpG island 20648
Cpgi20649	8	83652268 to 83653293	1025		CpG island	CpG island 20649
Tssr78275	8	83652632 to 83652633	1	+	TSS region	transcription start site region 78275
Tssr78276	8	83652651 to 83652667	16	+	TSS region	transcription start site region 78276
Tssr78277	8	83652670 to 83652711	41	+	TSS region	transcription start site region 78277
Gipc1	8	83652677 to 83664694	12017	+	protein coding gene	GIPC PDZ domain containing family, member 1
Tssr78278	8	83657556 to 83657564	8	+	TSS region	transcription start site region 78278
Cpgi20650	8	83661161 to 83661395	234		CpG island	CpG island 20650
Pkn1	8	83666536 to 83699179	32643	-	protein coding gene	protein kinase N1
Tssr78279	8	83666634 to 83666659	25	+	TSS region	transcription start site region 78279
Ptger1	8	83666678 to 83672753	6075	+	protein coding gene	prostaglandin E receptor 1 (subtype EP1)
Tssr78280	8	83666707 to 83666717	10	+	TSS region	transcription start site region 78280
Tssr78281	8	83666827 to 83666882	55	+	TSS region	transcription start site region 78281
Cpgi20651	8	83667699 to 83669480	1781		CpG island	CpG island 20651
Tssr82044	8	83683352 to 83683362	10	-	TSS region	transcription start site region 82044
Tssr82045	8	83690107 to 83690112	5	-	TSS region	transcription start site region 82045
Tssr78282	8	83691040 to 83691087	47	+	TSS region	transcription start site region 78282