Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:80901334-81229803

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi20632 8 80915788 to 80916051 263 CpG island CpG island 20632
Gm27048 8 80933534 to 80938667 5133 - lincRNA gene predicted gene, 27048
Tssr78161 8 80933603 to 80933608 5 + TSS region transcription start site region 78161
Gm4891 8 80933677 to 80934588 911 + pseudogene predicted gene 4891
Skmw16 8 80939547 to 80939696 149 QTL skeletal muscle weight 16
D8Mit249 8 80939547 to 80939696 149 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 249
Tssr78162 8 80948948 to 80948966 18 + TSS region transcription start site region 78162
Gm31223 8 80948963 to 80984052 35089 + lncRNA gene predicted gene, 31223
Tssr78163 8 80948994 to 80949000 6 + TSS region transcription start site region 78163
Tssr78164 8 80950107 to 80950111 4 + TSS region transcription start site region 78164
D8Mit135 8 80963583 to 80963782 199 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 135
Cpgi20633 8 80971390 to 80971762 372 CpG island CpG island 20633
Usp38 8 80980733 to 81014928 34195 - protein coding gene ubiquitin specific peptidase 38
Tssr81928 8 81004701 to 81004704 3 - TSS region transcription start site region 81928
Cpgi20634 8 81013851 to 81015418 1567 CpG island CpG island 20634
Tssr81929 8 81014787 to 81014795 8 - TSS region transcription start site region 81929
Tssr81930 8 81014845 to 81014862 17 - TSS region transcription start site region 81930
Tssr81931 8 81014866 to 81014942 76 - TSS region transcription start site region 81931
Tssr78165 8 81015151 to 81015189 38 + TSS region transcription start site region 78165
Tssr78166 8 81015194 to 81015211 17 + TSS region transcription start site region 78166
Gm9725 8 81032374 to 81061276 28902 + antisense lncRNA gene predicted gene 9725
Tssr81932 8 81043408 to 81043423 15 - TSS region transcription start site region 81932
Gm45538 8 81061334 to 81069803 8469 + lincRNA gene predicted gene 45538
Gm4899 8 81197630 to 81198348 718 - pseudogene predicted gene 4899