Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:80835107-81065111

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gab1 8 80764438 to 80880519 116081 - protein coding gene growth factor receptor bound protein 2-associated protein 1
Tssr81911 8 80835326 to 80835331 5 - TSS region transcription start site region 81911
Tssr81912 8 80859236 to 80859252 16 - TSS region transcription start site region 81912
Tssr81913 8 80859259 to 80859269 10 - TSS region transcription start site region 81913
Tssr78159 8 80859373 to 80859384 11 + TSS region transcription start site region 78159
1700019H22Rik 8 80859385 to 80860003 618 unclassified gene RIKEN cDNA 1700019H22 gene
Tssr78160 8 80859385 to 80859409 24 + TSS region transcription start site region 78160
Tssr81914 8 80859826 to 80859829 3 - TSS region transcription start site region 81914
Tssr81915 8 80861101 to 80861119 18 - TSS region transcription start site region 81915
Tssr81916 8 80869143 to 80869152 9 - TSS region transcription start site region 81916
Tssr81917 8 80869156 to 80869204 48 - TSS region transcription start site region 81917
Tssr81918 8 80869244 to 80869255 11 - TSS region transcription start site region 81918
Cpgi20631 8 80879105 to 80881002 1897 CpG island CpG island 20631
Tssr81919 8 80879780 to 80879801 21 - TSS region transcription start site region 81919
Tssr81920 8 80879890 to 80879926 36 - TSS region transcription start site region 81920
Tssr81921 8 80879929 to 80879946 17 - TSS region transcription start site region 81921
Gm31105 8 80879940 to 80881169 1229 + antisense lncRNA gene predicted gene, 31105
Tssr81922 8 80880161 to 80880249 88 - TSS region transcription start site region 81922
Tssr81923 8 80880274 to 80880306 32 - TSS region transcription start site region 81923
Tssr81924 8 80880309 to 80880327 18 - TSS region transcription start site region 81924
Tssr81925 8 80880463 to 80880471 8 - TSS region transcription start site region 81925
Tssr81926 8 80880480 to 80880499 19 - TSS region transcription start site region 81926
Tssr81927 8 80880507 to 80880534 27 - TSS region transcription start site region 81927
Cpgi20632 8 80915788 to 80916051 263 CpG island CpG island 20632
Gm27048 8 80933534 to 80938667 5133 - lincRNA gene predicted gene, 27048
Tssr78161 8 80933603 to 80933608 5 + TSS region transcription start site region 78161
Gm4891 8 80933677 to 80934588 911 + pseudogene predicted gene 4891
Skmw16 8 80939547 to 80939696 149 QTL skeletal muscle weight 16
D8Mit249 8 80939547 to 80939696 149 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 249
Tssr78162 8 80948948 to 80948966 18 + TSS region transcription start site region 78162
Gm31223 8 80948963 to 80984052 35089 + lncRNA gene predicted gene, 31223
Tssr78163 8 80948994 to 80949000 6 + TSS region transcription start site region 78163
Tssr78164 8 80950107 to 80950111 4 + TSS region transcription start site region 78164
D8Mit135 8 80963583 to 80963782 199 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 135
Cpgi20633 8 80971390 to 80971762 372 CpG island CpG island 20633
Usp38 8 80980733 to 81014928 34195 - protein coding gene ubiquitin specific peptidase 38
Tssr81928 8 81004701 to 81004704 3 - TSS region transcription start site region 81928
Cpgi20634 8 81013851 to 81015418 1567 CpG island CpG island 20634
Tssr81929 8 81014787 to 81014795 8 - TSS region transcription start site region 81929
Tssr81930 8 81014845 to 81014862 17 - TSS region transcription start site region 81930
Tssr81931 8 81014866 to 81014942 76 - TSS region transcription start site region 81931
Tssr78165 8 81015151 to 81015189 38 + TSS region transcription start site region 78165
Tssr78166 8 81015194 to 81015211 17 + TSS region transcription start site region 78166
Gm9725 8 81032374 to 81061276 28902 + antisense lncRNA gene predicted gene 9725
Tssr81932 8 81043408 to 81043423 15 - TSS region transcription start site region 81932
Gm45538 8 81061334 to 81069803 8469 + lincRNA gene predicted gene 45538