Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:80491080-80815356

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr2614 8 80493970 to 80493979 9 + TSS region transcription start site region 2614
Tssr78154 8 80494032 to 80494065 33 + TSS region transcription start site region 78154
Gypa 8 80494045 to 80510785 16740 + protein coding gene glycophorin A
Tssr78155 8 80494251 to 80494255 4 + TSS region transcription start site region 78155
Tssr78156 8 80496294 to 80496311 17 + TSS region transcription start site region 78156
4930505O20Rik 8 80512489 to 80514490 2001 - antisense lncRNA gene RIKEN cDNA 4930505O20 gene
Gm39209 8 80512544 to 80526165 13621 + lncRNA gene predicted gene, 39209
Gm46044 8 80525705 to 80592537 66832 - lncRNA gene predicted gene, 46044
Frem3 8 80611080 to 80695356 84276 + protein coding gene Fras1 related extracellular matrix protein 3
Cpgi20628 8 80611186 to 80611821 635 CpG island CpG island 20628
D8Ertd572e 8 80646485 to 80646707 222 DNA segment DNA segment, Chr 8, ERATO Doi 572, expressed
Smarca5 8 80699943 to 80739459 39516 - protein coding gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
Tssr81904 8 80700631 to 80700636 5 - TSS region transcription start site region 81904
Gm45872 8 80727554 to 80729137 1583 - unclassified gene predicted gene 45872
Cpgi20629 8 80738313 to 80739328 1015 CpG island CpG island 20629
Tssr81905 8 80739030 to 80739058 28 - TSS region transcription start site region 81905
Tssr81906 8 80739299 to 80739338 39 - TSS region transcription start site region 81906
Cpgi20630 8 80739627 to 80740197 570 CpG island CpG island 20630
D8Mit344 8 80743245 to 80743344 99 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 344
Gab1 8 80764438 to 80880519 116081 - protein coding gene growth factor receptor bound protein 2-associated protein 1
Tssr78157 8 80770592 to 80770597 5 + TSS region transcription start site region 78157
Gm7997 8 80770691 to 80771670 979 + pseudogene predicted gene 7997
Tssr81907 8 80788656 to 80788688 32 - TSS region transcription start site region 81907
Tssr81908 8 80788821 to 80788853 32 - TSS region transcription start site region 81908
Tssr81909 8 80788935 to 80788947 12 - TSS region transcription start site region 81909
Tssr81910 8 80800357 to 80800380 23 - TSS region transcription start site region 81910
Tssr78158 8 80811600 to 80811602 2 + TSS region transcription start site region 78158