Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:72119720-72319723

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39196 8 72118451 to 72125924 7473 - lncRNA gene predicted gene, 39196
Cpgi20580 8 72134884 to 72136361 1477 CpG island CpG island 20580
Tssr77935 8 72135247 to 72135264 17 + TSS region transcription start site region 77935
Tssr77936 8 72135279 to 72135294 15 + TSS region transcription start site region 77936
Tpm4 8 72135292 to 72153129 17837 + protein coding gene tropomyosin 4
Tssr77937 8 72135302 to 72135314 12 + TSS region transcription start site region 77937
Tssr81767 8 72135731 to 72135766 35 - TSS region transcription start site region 81767
Tssr77938 8 72135763 to 72135828 65 + TSS region transcription start site region 77938
Tssr77939 8 72135842 to 72135866 24 + TSS region transcription start site region 77939
Tssr81768 8 72136729 to 72136751 22 - TSS region transcription start site region 81768
Tssr81769 8 72136774 to 72136789 15 - TSS region transcription start site region 81769
Tssr81770 8 72136798 to 72136815 17 - TSS region transcription start site region 81770
Gm26586 8 72137389 to 72140820 3431 - antisense lncRNA gene predicted gene, 26586
Tssr77940 8 72138629 to 72138665 36 + TSS region transcription start site region 77940
Tssr77941 8 72144536 to 72144545 9 + TSS region transcription start site region 77941
Tssr77942 8 72144559 to 72144585 26 + TSS region transcription start site region 77942
Tssr77943 8 72144590 to 72144636 46 + TSS region transcription start site region 77943
Tssr77944 8 72144644 to 72144661 17 + TSS region transcription start site region 77944
Tssr77945 8 72144663 to 72144683 20 + TSS region transcription start site region 77945
Gm16091 8 72147601 to 72160855 13254 - unclassified non-coding RNA gene predicted gene 16091
Tssr77946 8 72152562 to 72152584 22 + TSS region transcription start site region 77946
Tssr77947 8 72152596 to 72152610 14 + TSS region transcription start site region 77947
Tssr77948 8 72152624 to 72152636 12 + TSS region transcription start site region 77948
Tssr81771 8 72160545 to 72160552 7 - TSS region transcription start site region 81771
Cpgi20581 8 72160560 to 72161739 1179 CpG island CpG island 20581
Tssr81772 8 72160805 to 72160869 64 - TSS region transcription start site region 81772
Tssr77949 8 72161101 to 72161147 46 + TSS region transcription start site region 77949
Rab8a 8 72161200 to 72181366 20166 + protein coding gene RAB8A, member RAS oncogene family
Tssr77950 8 72161334 to 72161369 35 + TSS region transcription start site region 77950
Tssr81773 8 72162949 to 72162960 11 - TSS region transcription start site region 81773
Tssr77951 8 72169286 to 72169291 5 + TSS region transcription start site region 77951
Tssr77952 8 72183986 to 72183990 4 + TSS region transcription start site region 77952
Tssr77953 8 72189613 to 72189664 51 + TSS region transcription start site region 77953
Hsh2d 8 72189668 to 72200958 11290 + protein coding gene hematopoietic SH2 domain containing
Cib3 8 72204335 to 72212837 8502 - protein coding gene calcium and integrin binding family member 3
Gm11034 8 72213494 to 72213636 142 - protein coding gene predicted gene 11034
Tssr77954 8 72219020 to 72219036 16 + TSS region transcription start site region 77954
Cpgi20582 8 72219558 to 72220173 615 CpG island CpG island 20582
Tssr77955 8 72219720 to 72219723 3 + TSS region transcription start site region 77955
Tssr77956 8 72219726 to 72219785 59 + TSS region transcription start site region 77956
Fam32a 8 72219730 to 72223775 4045 + protein coding gene family with sequence similarity 32, member A
Tssr77957 8 72219797 to 72219808 11 + TSS region transcription start site region 77957
Cpgi20583 8 72239514 to 72240704 1190 CpG island CpG island 20583
Tssr77958 8 72240034 to 72240045 11 + TSS region transcription start site region 77958
Tssr77959 8 72240052 to 72240181 129 + TSS region transcription start site region 77959
Ap1m1 8 72240052 to 72257385 17333 + protein coding gene adaptor-related protein complex AP-1, mu subunit 1
Tssr77960 8 72240315 to 72240346 31 + TSS region transcription start site region 77960
Tssr77961 8 72240348 to 72240353 5 + TSS region transcription start site region 77961
Tssr77962 8 72247414 to 72247432 18 + TSS region transcription start site region 77962
Tssr77963 8 72255761 to 72255767 6 + TSS region transcription start site region 77963
Tssr81774 8 72268435 to 72268477 42 - TSS region transcription start site region 81774
Tssr77964 8 72268605 to 72268618 13 + TSS region transcription start site region 77964
Tssr77965 8 72268703 to 72268712 9 + TSS region transcription start site region 77965
Gm39197 8 72283698 to 72284154 456 - pseudogene predicted gene, 39197
Tssr81775 8 72284936 to 72284945 9 - TSS region transcription start site region 81775
Tssr81776 8 72284948 to 72284957 9 - TSS region transcription start site region 81776
Tssr81777 8 72284961 to 72284980 19 - TSS region transcription start site region 81777
Tssr81778 8 72284998 to 72285009 11 - TSS region transcription start site region 81778
Tssr77966 8 72295914 to 72295918 4 + TSS region transcription start site region 77966
Gm40505 8 72300466 to 72302154 1688 + lncRNA gene predicted gene, 40505
Gm10282 8 72304110 to 72305260 1150 - pseudogene predicted pseudogene 10282
Tssr77967 8 72311503 to 72311511 8 + TSS region transcription start site region 77967
Cpgi20584 8 72318598 to 72321031 2433 CpG island CpG island 20584
Tssr77968 8 72318881 to 72318892 11 + TSS region transcription start site region 77968
Tssr77969 8 72318893 to 72318915 22 + TSS region transcription start site region 77969
Tssr2606 8 72318900 to 72318908 8 - TSS region transcription start site region 2606
Tssr77970 8 72319053 to 72319071 18 + TSS region transcription start site region 77970
Klf2 8 72319062 to 72321654 2592 + protein coding gene Kruppel-like factor 2 (lung)
Tssr77971 8 72319533 to 72319571 38 + TSS region transcription start site region 77971
Tssr77972 8 72319583 to 72319607 24 + TSS region transcription start site region 77972
Tssr77973 8 72319620 to 72319634 14 + TSS region transcription start site region 77973
Tssr77974 8 72319676 to 72319699 23 + TSS region transcription start site region 77974