Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:71681762-71721784

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Jak3 8 71676383 to 71690577 14194 + protein coding gene Janus kinase 3
Cpgi20564 8 71684393 to 71684583 190 CpG island CpG island 20564
Cpgi20565 8 71685216 to 71687289 2073 CpG island CpG island 20565
Tssr77913 8 71686734 to 71686774 40 + TSS region transcription start site region 77913
Tssr77914 8 71686788 to 71686808 20 + TSS region transcription start site region 77914
Tssr77915 8 71687223 to 71687241 18 + TSS region transcription start site region 77915
Cpgi20566 8 71687980 to 71688227 247 CpG island CpG island 20566
Cpgi20567 8 71689070 to 71689541 471 CpG island CpG island 20567
Tssr77916 8 71689244 to 71689258 14 + TSS region transcription start site region 77916
Insl3 8 71689252 to 71690577 1325 + protein coding gene insulin-like 3
Cpgi20568 8 71689887 to 71690454 567 CpG island CpG island 20568
Tssr77917 8 71690218 to 71690229 11 + TSS region transcription start site region 77917
Tssr77918 8 71690382 to 71690401 19 + TSS region transcription start site region 77918
Tssr77919 8 71690483 to 71690537 54 + TSS region transcription start site region 77919
Tssr81747 8 71690572 to 71690574 2 - TSS region transcription start site region 81747
B3gnt3 8 71690756 to 71701789 11033 - protein coding gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3
Cpgi20569 8 71692481 to 71694135 1654 CpG island CpG island 20569
Tssr77920 8 71692910 to 71692922 12 + TSS region transcription start site region 77920
Tssr81748 8 71693822 to 71693857 35 - TSS region transcription start site region 81748
Gm45756 8 71695608 to 71696014 406 + pseudogene predicted gene 45756
Cpgi20570 8 71701455 to 71701836 381 CpG island CpG island 20570
Tssr81749 8 71701742 to 71701754 12 - TSS region transcription start site region 81749
Tssr81750 8 71701762 to 71701784 22 - TSS region transcription start site region 81750
Tssr81751 8 71701796 to 71701841 45 - TSS region transcription start site region 81751
Tssr81752 8 71702606 to 71702634 28 - TSS region transcription start site region 81752
Gm18860 8 71704205 to 71704968 763 - pseudogene predicted gene, 18860
D8Mit9 8 71706614 to 71706763 149 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 9
Im3 8 71706614 to 71706763 149 QTL immunoregulatory 3
Fcho1 8 71708387 to 71725703 17316 - protein coding gene FCH domain only 1
Cpgi20571 8 71708844 to 71709034 190 CpG island CpG island 20571
Cpgi20572 8 71709562 to 71710001 439 CpG island CpG island 20572
Tssr81753 8 71717208 to 71717217 9 - TSS region transcription start site region 81753
Tssr81754 8 71719227 to 71719238 11 - TSS region transcription start site region 81754