Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:70777407-71017423

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi20500 8 70775873 to 70777723 1850 CpG island CpG island 20500
2010320M18Rik 8 70776862 to 70777606 744 + lincRNA gene RIKEN cDNA 2010320M18 gene
Mast3 8 70778117 to 70805054 26937 - protein coding gene microtubule associated serine/threonine kinase 3
Cpgi20501 8 70787715 to 70788488 773 CpG island CpG island 20501
Cpgi20502 8 70791960 to 70793249 1289 CpG island CpG island 20502
Tssr81676 8 70792392 to 70792451 59 - TSS region transcription start site region 81676
Cpgi20503 8 70796334 to 70798174 1840 CpG island CpG island 20503
Tssr81677 8 70796992 to 70797019 27 - TSS region transcription start site region 81677
Mir7240 8 70798135 to 70798192 57 + miRNA gene microRNA 7240
Cpgi20504 8 70803880 to 70805250 1370 CpG island CpG island 20504
Tssr81678 8 70804979 to 70804999 20 - TSS region transcription start site region 81678
Tssr81679 8 70805001 to 70805010 9 - TSS region transcription start site region 81679
Tssr77831 8 70808378 to 70808400 22 + TSS region transcription start site region 77831
Tssr77832 8 70808431 to 70808474 43 + TSS region transcription start site region 77832
Il12rb1 8 70808449 to 70821424 12975 + protein coding gene interleukin 12 receptor, beta 1
Cpgi20505 8 70816674 to 70817340 666 CpG island CpG island 20505
Cpgi20506 8 70820485 to 70820761 276 CpG island CpG island 20506
Cpgi20507 8 70821446 to 70821977 531 CpG island CpG island 20507
Arrdc2 8 70835129 to 70839720 4591 - protein coding gene arrestin domain containing 2
Cpgi20508 8 70838668 to 70840138 1470 CpG island CpG island 20508
Tssr81680 8 70839526 to 70839542 16 - TSS region transcription start site region 81680
Tssr81681 8 70839651 to 70839666 15 - TSS region transcription start site region 81681
Tssr77833 8 70841272 to 70841302 30 + TSS region transcription start site region 77833
Kcnn1 8 70842049 to 70863258 21209 - protein coding gene potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
Cpgi20509 8 70842510 to 70842768 258 CpG island CpG island 20509
Cpgi20510 8 70856494 to 70857088 594 CpG island CpG island 20510
Cpgi20511 8 70862670 to 70864561 1891 CpG island CpG island 20511
A230052G05Rik 8 70863127 to 70865428 2301 + unclassified gene RIKEN cDNA A230052G05 gene
Tssr81682 8 70863749 to 70863765 16 - TSS region transcription start site region 81682
Cpgi20512 8 70864568 to 70865964 1396 CpG island CpG island 20512
Ccdc124 8 70868226 to 70873490 5264 - protein coding gene coiled-coil domain containing 124
Cpgi20513 8 70868424 to 70869228 804 CpG island CpG island 20513
Cpgi20514 8 70869797 to 70870066 269 CpG island CpG island 20514
Cpgi20515 8 70872940 to 70873887 947 CpG island CpG island 20515
Tssr81683 8 70873231 to 70873238 7 - TSS region transcription start site region 81683
Tssr81684 8 70873477 to 70873501 24 - TSS region transcription start site region 81684
Slc5a5 8 70882889 to 70892757 9868 - protein coding gene solute carrier family 5 (sodium iodide symporter), member 5
Cpgi20516 8 70887757 to 70887987 230 CpG island CpG island 20516
Tssr81685 8 70887834 to 70887894 60 - TSS region transcription start site region 81685
Cpgi20517 8 70891249 to 70893267 2018 CpG island CpG island 20517
Tssr81686 8 70892752 to 70892758 6 - TSS region transcription start site region 81686
Rpl18a 8 70894722 to 70897412 2690 - protein coding gene ribosomal protein L18A
Mir7067 8 70895508 to 70895570 62 - miRNA gene microRNA 7067
Tssr81687 8 70895713 to 70895719 6 - TSS region transcription start site region 81687
Snora68 8 70895759 to 70895856 97 - snoRNA gene small nucleolar RNA, H/ACA box 68
Tssr81688 8 70895883 to 70895889 6 - TSS region transcription start site region 81688
Cpgi20518 8 70896703 to 70897872 1169 CpG island CpG island 20518
Tssr81689 8 70897407 to 70897423 16 - TSS region transcription start site region 81689
Tssr81690 8 70897437 to 70897448 11 - TSS region transcription start site region 81690
Tssr77834 8 70897625 to 70897670 45 + TSS region transcription start site region 77834
Cpgi20519 8 70905470 to 70906802 1332 CpG island CpG island 20519
Tssr77835 8 70905970 to 70906017 47 + TSS region transcription start site region 77835
Map1s 8 70905974 to 70917529 11555 + protein coding gene microtubule-associated protein 1S
Mir1969 8 70925525 to 70925618 93 + miRNA gene microRNA 1969
Gm10654 8 70931405 to 70933037 1632 + protein coding gene predicted gene 10654
1700026F02Rik 8 71006728 to 71026755 20027 - lincRNA gene RIKEN cDNA 1700026F02 gene
D8Mit179.1 8 71012779 to 71012889 110 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 179.1
D8Mit179 8 71012950 to 71013088 138 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 179
D8Mit179.2 8 71013003 to 71013112 109 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 179.2