MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:70287754-70317760

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Homer3	8	70282891 to 70294361	11470	+	protein coding gene	homer scaffolding protein 3
Ddx49	8	70292866 to 70302489	9623	-	protein coding gene	DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
Cpgi20449	8	70302004 to 70303037	1033		CpG island	CpG island 20449
Tssr81603	8	70302446 to 70302478	32	-	TSS region	transcription start site region 81603
Tssr81604	8	70302487 to 70302488	1	-	TSS region	transcription start site region 81604
Tssr77727	8	70302543 to 70302630	87	+	TSS region	transcription start site region 77727
Tssr77728	8	70302754 to 70302760	6	+	TSS region	transcription start site region 77728
Tssr77729	8	70302761 to 70302804	43	+	TSS region	transcription start site region 77729
Cope	8	70302785 to 70312990	10205	+	protein coding gene	coatomer protein complex, subunit epsilon
Tssr81605	8	70302879 to 70302892	13	-	TSS region	transcription start site region 81605
Tssr81606	8	70302894 to 70302934	40	-	TSS region	transcription start site region 81606
Tssr81607	8	70303123 to 70303127	4	-	TSS region	transcription start site region 81607
Tssr2596	8	70310377 to 70310397	20	+	TSS region	transcription start site region 2596
Cpgi20450	8	70315406 to 70316594	1188		CpG island	CpG island 20450
Tssr77730	8	70315759 to 70315835	76	+	TSS region	transcription start site region 77730
Cers1	8	70315775 to 70331588	15813	+	protein coding gene	ceramide synthase 1
Tssr77731	8	70315836 to 70315846	10	+	TSS region	transcription start site region 77731
Tssr81608	8	70316203 to 70316217	14	-	TSS region	transcription start site region 81608