Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:62006195-63896215

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ddx60 8 61928064 to 62037704 109640 + protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
Tssr77529 8 62014424 to 62014436 12 + TSS region transcription start site region 77529
Tssr77530 8 62017134 to 62017155 21 + TSS region transcription start site region 77530
Tssr77531 8 62025046 to 62025057 11 + TSS region transcription start site region 77531
Anxa10 8 62057042 to 62123150 66108 - protein coding gene annexin A10
Tssr81403 8 62123106 to 62123123 17 - TSS region transcription start site region 81403
Tssr81404 8 62123129 to 62123138 9 - TSS region transcription start site region 81404
Tssr81405 8 62123144 to 62123155 11 - TSS region transcription start site region 81405
Tssr81406 8 62123186 to 62123200 14 - TSS region transcription start site region 81406
Tssr81407 8 62123304 to 62123328 24 - TSS region transcription start site region 81407
Gm2961 8 62193441 to 62194212 771 - pseudogene predicted gene 2961
Hspd1-ps2 8 62486792 to 62488488 1696 - pseudogene heat shock protein 1 (chaperonin), pseudogene 2
D8Mit70 8 62488890 to 62489062 172 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 70
Gm2975 8 62539650 to 62540469 819 + pseudogene predicted gene 2975
Gm7561 8 62546946 to 62547831 885 - pseudogene predicted gene 7561
Tssr81408 8 62547853 to 62547873 20 - TSS region transcription start site region 81408
Gm45460 8 62616317 to 62634645 18328 - lincRNA gene predicted gene 45460
Gm45459 8 62646335 to 62855382 209047 - lincRNA gene predicted gene 45459
Gm45462 8 62749686 to 62761858 12172 + lincRNA gene predicted gene 45462
Gm22324 8 62783612 to 62783725 113 + snoRNA gene predicted gene, 22324
Tssr81409 8 62892682 to 62892684 2 - TSS region transcription start site region 81409
Spock3 8 62951091 to 63357101 406010 + protein coding gene sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
Tssr77532 8 62951195 to 62951215 20 + TSS region transcription start site region 77532
Cpgi20383 8 62951343 to 62952018 675 CpG island CpG island 20383
Tssr77533 8 62951391 to 62951498 107 + TSS region transcription start site region 77533
Tssr77534 8 62958972 to 62958977 5 + TSS region transcription start site region 77534
Gm45461 8 62979221 to 62983755 4534 + unclassified gene predicted gene 45461
Gm45516 8 63020866 to 63025047 4181 + unclassified gene predicted gene 45516
D8Dcr26 8 63091976 to 63092076 100 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 26
Gm24236 8 63108674 to 63108807 133 - snoRNA gene predicted gene, 24236
Gm45517 8 63198972 to 63201439 2467 + unclassified gene predicted gene 45517
D8Mit367 8 63268412 to 63268508 96 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology-367
Gm18645 8 63522936 to 63525890 2954 + pseudogene predicted gene, 18645
Gm35368 8 63545943 to 63552805 6862 + lincRNA gene predicted gene, 35368
Gm45589 8 63700863 to 63739577 38714 - lincRNA gene predicted gene 45589
Gm35424 8 63748212 to 63777476 29264 - lncRNA gene predicted gene, 35424
Gm5350 8 63778051 to 63779052 1001 + pseudogene predicted gene 5350
Tssr81410 8 63828245 to 63828256 11 - TSS region transcription start site region 81410
Gm24580 8 63878196 to 63878326 130 + snoRNA gene predicted gene, 24580