MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:48435897-48675981

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D930044I17Rik	8	48485269 to 48488747	3478		unclassified gene	RIKEN cDNA D930044I17 gene
D8Mit127	8	48535288 to 48535438	150		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 127
Tssr81267	8	48552893 to 48552898	5	-	TSS region	transcription start site region 81267
Cpgi20343	8	48554815 to 48556221	1406		CpG island	CpG island 20343
Tssr81268	8	48554878 to 48554900	22	-	TSS region	transcription start site region 81268
Tssr81269	8	48555200 to 48555244	44	-	TSS region	transcription start site region 81269
Tssr81270	8	48555257 to 48555268	11	-	TSS region	transcription start site region 81270
Tssr81271	8	48555270 to 48555303	33	-	TSS region	transcription start site region 81271
Tssr81272	8	48555402 to 48555431	29	-	TSS region	transcription start site region 81272
Tssr81273	8	48555897 to 48555981	84	-	TSS region	transcription start site region 81273
Tssr81274	8	48556007 to 48556088	81	-	TSS region	transcription start site region 81274
Tssr81275	8	48615642 to 48615651	9	-	TSS region	transcription start site region 81275
Gm45772	8	48630930 to 48631169	239	-	pseudogene	predicted gene 45772
Tssr77349	8	48632859 to 48632863	4	+	TSS region	transcription start site region 77349
Cpgi20344	8	48646177 to 48646409	232		CpG island	CpG island 20344
Gm39178	8	48660798 to 48671892	11094	+	lncRNA gene	predicted gene, 39178
Tssr81276	8	48668607 to 48668629	22	-	TSS region	transcription start site region 81276
Tssr81277	8	48668710 to 48668731	21	-	TSS region	transcription start site region 81277