Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:47709054-47821125

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdkn2aip 8 47709344 to 47713932 4588 - protein coding gene CDKN2A interacting protein
Tssr81246 8 47710620 to 47710624 4 - TSS region transcription start site region 81246
Tssr81247 8 47711656 to 47711677 21 - TSS region transcription start site region 81247
Cpgi20333 8 47713062 to 47714761 1699 CpG island CpG island 20333
E030037K01Rik 8 47713266 to 47715021 1755 + antisense lncRNA gene RIKEN cDNA E030037K01 gene
Tssr81248 8 47713895 to 47713908 13 - TSS region transcription start site region 81248
Tssr81249 8 47713920 to 47713938 18 - TSS region transcription start site region 81249
Tssr81250 8 47714105 to 47714110 5 - TSS region transcription start site region 81250
Tssr81251 8 47714135 to 47714156 21 - TSS region transcription start site region 81251
Tssr81252 8 47714163 to 47714170 7 - TSS region transcription start site region 81252
Tssr81253 8 47714489 to 47714511 22 - TSS region transcription start site region 81253
n-R5s96 8 47719246 to 47719369 123 + rRNA gene nuclear encoded rRNA 5S 96
Gm31786 8 47744712 to 47750134 5422 - lincRNA gene predicted gene, 31786
Tssr81254 8 47750133 to 47750140 7 - TSS region transcription start site region 81254
Tssr81255 8 47750156 to 47750197 41 - TSS region transcription start site region 81255
Gm45824 8 47764054 to 47766125 2071 - lincRNA gene predicted gene 45824
Gm45864 8 47773555 to 47777802 4247 + lincRNA gene predicted gene 45864
Tssr77338 8 47788842 to 47788848 6 + TSS region transcription start site region 77338
1700061N14Rik 8 47811724 to 47818221 6497 - lincRNA gene RIKEN cDNA 1700061N14 gene
Tssr81256 8 47818179 to 47818184 5 - TSS region transcription start site region 81256
Tssr81257 8 47818199 to 47818225 26 - TSS region transcription start site region 81257