Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:46635970-46834515

Filter by:
44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Casp3 8 46617291 to 46639689 22398 + protein coding gene caspase 3
Tssr77275 8 46638473 to 46638491 18 + TSS region transcription start site region 77275
Gm31111 8 46668942 to 46678998 10056 - lncRNA gene predicted gene, 31111
Cpgi20320 8 46686889 to 46687217 328 CpG island CpG island 20320
Gm16675 8 46730970 to 46739515 8545 - bidirectional promoter lncRNA gene predicted gene, 16675
Tssr81211 8 46735551 to 46735560 9 - TSS region transcription start site region 81211
Cpgi20321 8 46739126 to 46739859 733 CpG island CpG island 20321
Tssr81212 8 46739453 to 46739514 61 - TSS region transcription start site region 81212
Irf2 8 46739745 to 46847458 107713 + protein coding gene interferon regulatory factor 2
Tssr77276 8 46739753 to 46739791 38 + TSS region transcription start site region 77276
Tssr77277 8 46739812 to 46739824 12 + TSS region transcription start site region 77277
Tssr77278 8 46739841 to 46739846 5 + TSS region transcription start site region 77278
Tssr77279 8 46739849 to 46739871 22 + TSS region transcription start site region 77279
Tssr77280 8 46739876 to 46739885 9 + TSS region transcription start site region 77280
Cpgi20322 8 46740200 to 46741708 1508 CpG island CpG island 20322
Tssr77281 8 46740241 to 46740273 32 + TSS region transcription start site region 77281
Tssr77282 8 46740289 to 46740308 19 + TSS region transcription start site region 77282
Tssr77283 8 46745436 to 46745465 29 + TSS region transcription start site region 77283
Tssr77284 8 46749457 to 46749461 4 + TSS region transcription start site region 77284
Tssr77285 8 46750376 to 46750398 22 + TSS region transcription start site region 77285
Tssr77286 8 46752643 to 46752664 21 + TSS region transcription start site region 77286
Tssr77287 8 46755958 to 46755992 34 + TSS region transcription start site region 77287
Gm45479 8 46763251 to 46764973 1722 - antisense lncRNA gene predicted gene 45479
Tssr81213 8 46764995 to 46765025 30 - TSS region transcription start site region 81213
Tssr81214 8 46765058 to 46765063 5 - TSS region transcription start site region 81214
Tssr77288 8 46766704 to 46766707 3 + TSS region transcription start site region 77288
Gm31172 8 46770553 to 46770985 432 - antisense lncRNA gene predicted gene, 31172
Tssr81215 8 46773617 to 46773624 7 - TSS region transcription start site region 81215
Tssr77289 8 46788348 to 46788362 14 + TSS region transcription start site region 77289
Tssr77290 8 46791879 to 46791883 4 + TSS region transcription start site region 77290
Tssr77291 8 46791929 to 46791942 13 + TSS region transcription start site region 77291
Tssr77292 8 46793502 to 46793522 20 + TSS region transcription start site region 77292
Tssr77293 8 46795162 to 46795188 26 + TSS region transcription start site region 77293
D8Mit98 8 46801472 to 46801619 147 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 98
Tssr77294 8 46806469 to 46806482 13 + TSS region transcription start site region 77294
Tssr77295 8 46806496 to 46806512 16 + TSS region transcription start site region 77295
Tssr77296 8 46806518 to 46806538 20 + TSS region transcription start site region 77296
Tssr77297 8 46807232 to 46807243 11 + TSS region transcription start site region 77297
Tssr77298 8 46814152 to 46814162 10 + TSS region transcription start site region 77298
Tssr77299 8 46818812 to 46818850 38 + TSS region transcription start site region 77299
Gm39170 8 46826701 to 46829108 2407 - lncRNA gene predicted gene, 39170
Tssr81216 8 46828480 to 46828493 13 - TSS region transcription start site region 81216
Gm45481 8 46833036 to 46833912 876 - unclassified gene predicted gene 45481
Tssr77300 8 46834138 to 46834155 17 + TSS region transcription start site region 77300