Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:22207086-22407416

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps36 8 22192860 to 22218597 25737 + protein coding gene vacuolar protein sorting 36
Tssr76571 8 22216972 to 22216988 16 + TSS region transcription start site region 76571
Cpgi20147 8 22227049 to 22227592 543 CpG island CpG island 20147
Tssr76572 8 22227292 to 22227320 28 + TSS region transcription start site region 76572
Thsd1 8 22227313 to 22261334 34021 + protein coding gene thrombospondin, type I, domain 1
Tssr76573 8 22227322 to 22227357 35 + TSS region transcription start site region 76573
Rpl30-ps2 8 22230902 to 22231192 290 - pseudogene ribosomal protein L30, pseudogene 2
Cpgi20148 8 22258378 to 22258660 282 CpG island CpG island 20148
Tpte 8 22283441 to 22371418 87977 + protein coding gene transmembrane phosphatase with tensin homology
Gm46035 8 22307086 to 22307416 330 + pseudogene predicted gene, 46035
D8Mit257 8 22316647 to 22316757 110 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 257
Tssr2512 8 22340019 to 22340021 2 + TSS region transcription start site region 2512
Slc25a15 8 22375551 to 22398597 23046 - protein coding gene solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15
Tssr80586 8 22396232 to 22396248 16 - TSS region transcription start site region 80586
Cpgi20149 8 22397910 to 22399014 1104 CpG island CpG island 20149
Tssr80587 8 22398260 to 22398276 16 - TSS region transcription start site region 80587
Tssr80588 8 22398349 to 22398361 12 - TSS region transcription start site region 80588
Tssr80589 8 22398470 to 22398471 1 - TSS region transcription start site region 80589
Tssr80590 8 22398483 to 22398497 14 - TSS region transcription start site region 80590
Tssr80591 8 22398588 to 22398612 24 - TSS region transcription start site region 80591
1810012K16Rik 8 22398721 to 22399591 870 + lincRNA gene RIKEN cDNA 1810012K16 gene
Gm45452 8 22402576 to 22402752 176 - pseudogene predicted gene 45452
Tssr76574 8 22405244 to 22405245 1 + TSS region transcription start site region 76574