Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:124056394-124520722

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20388 8 119910841 to 124345722 4434881 + protein coding gene predicted gene 20388
Gm29897 8 124049462 to 124073598 24136 + lncRNA gene predicted gene, 29897
Tssr80018 8 124066777 to 124066788 11 + TSS region transcription start site region 80018
Tssr80019 8 124066789 to 124066796 7 + TSS region transcription start site region 80019
Tssr80020 8 124067132 to 124067139 7 + TSS region transcription start site region 80020
D8Mit49 8 124070940 to 124071089 149 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 49
Gm30005 8 124075853 to 124088603 12750 - lncRNA gene predicted gene, 30005
Tssr83425 8 124080777 to 124080801 24 - TSS region transcription start site region 83425
Tssr83426 8 124080821 to 124080824 3 - TSS region transcription start site region 83426
Tssr83427 8 124080840 to 124080845 5 - TSS region transcription start site region 83427
Gm30081 8 124137873 to 124152961 15088 - lncRNA gene predicted gene, 30081
Tssr83428 8 124149796 to 124149800 4 - TSS region transcription start site region 83428
Tssr83429 8 124152804 to 124152815 11 - TSS region transcription start site region 83429
Tssr83430 8 124152914 to 124152939 25 - TSS region transcription start site region 83430
Gm3889 8 124160073 to 124160684 611 + pseudogene predicted gene 3889
D8Ski10 8 124190823 to 124191027 204 DNA segment DNA segment, Chr 8, Sloan-Kettering Institute 10
Gm42054 8 124196553 to 124206307 9754 + lncRNA gene predicted gene, 42054
Tssr80021 8 124197105 to 124197123 18 + TSS region transcription start site region 80021
Tssr80022 8 124197139 to 124197154 15 + TSS region transcription start site region 80022
Cpgi21266 8 124230931 to 124232589 1658 CpG island CpG island 21266
Tssr80023 8 124231359 to 124231450 91 + TSS region transcription start site region 80023
Galnt2 8 124231394 to 124345722 114328 + protein coding gene polypeptide N-acetylgalactosaminyltransferase 2
Tssr80024 8 124231461 to 124231530 69 + TSS region transcription start site region 80024
Tssr80025 8 124271888 to 124271917 29 + TSS region transcription start site region 80025
Tssr83431 8 124273956 to 124273966 10 - TSS region transcription start site region 83431
Tssr83432 8 124274472 to 124274487 15 - TSS region transcription start site region 83432
Tssr80026 8 124274682 to 124274724 42 + TSS region transcription start site region 80026
1810008B01Rik 8 124305132 to 124306507 1375 - antisense lncRNA gene RIKEN cDNA 1810008B01 gene
Tssr80027 8 124318162 to 124318171 9 + TSS region transcription start site region 80027
Gm15775 8 124324778 to 124331795 7017 - antisense lncRNA gene predicted gene 15775
Tssr80028 8 124340566 to 124340569 3 + TSS region transcription start site region 80028
Tssr80029 8 124357232 to 124357244 12 + TSS region transcription start site region 80029
Gm24459 8 124357238 to 124357323 85 + snRNA gene predicted gene, 24459
Pgbd5 8 124369049 to 124434462 65413 - protein coding gene piggyBac transposable element derived 5
Tssr83433 8 124369899 to 124369918 19 - TSS region transcription start site region 83433
Tssr83434 8 124369963 to 124369972 9 - TSS region transcription start site region 83434
Tssr83435 8 124369987 to 124369999 12 - TSS region transcription start site region 83435
Cpgi21267 8 124384337 to 124384600 263 CpG island CpG island 21267
Tssr83436 8 124406383 to 124406388 5 - TSS region transcription start site region 83436
Cpgi21268 8 124433310 to 124434924 1614 CpG island CpG island 21268
Tssr83437 8 124434323 to 124434372 49 - TSS region transcription start site region 83437
Tssr83438 8 124434442 to 124434505 63 - TSS region transcription start site region 83438
C330016L05Rik 8 124445374 to 124460100 14726 - lncRNA gene RIKEN cDNA C330016L05 gene
Gm30209 8 124460710 to 124468237 7527 - lncRNA gene predicted gene, 30209
D8Mit323 8 124463020 to 124463120 100 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 323
Phdlc2 8 124464422 to 129018580 4554158 QTL plasma HDL cholesterol 2
D8Mit91 8 124464422 to 124464565 143 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 91
Gm39280 8 124508230 to 124512287 4057 - lncRNA gene predicted gene, 39280
Cpgi21269 8 124520504 to 124521329 825 CpG island CpG island 21269