Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:124046553-124356307

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20388 8 119910841 to 124345722 4434881 + protein coding gene predicted gene 20388
Urb2 8 124021508 to 124048505 26997 + protein coding gene URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
Gm45732 8 124025072 to 124048412 23340 - antisense lncRNA gene predicted gene 45732
Tssr80016 8 124047145 to 124047162 17 + TSS region transcription start site region 80016
Tssr80017 8 124047607 to 124047615 8 + TSS region transcription start site region 80017
Gm29897 8 124049462 to 124073598 24136 + lncRNA gene predicted gene, 29897
Tssr80018 8 124066777 to 124066788 11 + TSS region transcription start site region 80018
Tssr80019 8 124066789 to 124066796 7 + TSS region transcription start site region 80019
Tssr80020 8 124067132 to 124067139 7 + TSS region transcription start site region 80020
D8Mit49 8 124070940 to 124071089 149 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 49
Gm30005 8 124075853 to 124088603 12750 - lncRNA gene predicted gene, 30005
Tssr83425 8 124080777 to 124080801 24 - TSS region transcription start site region 83425
Tssr83426 8 124080821 to 124080824 3 - TSS region transcription start site region 83426
Tssr83427 8 124080840 to 124080845 5 - TSS region transcription start site region 83427
Gm30081 8 124137873 to 124152961 15088 - lncRNA gene predicted gene, 30081
Tssr83428 8 124149796 to 124149800 4 - TSS region transcription start site region 83428
Tssr83429 8 124152804 to 124152815 11 - TSS region transcription start site region 83429
Tssr83430 8 124152914 to 124152939 25 - TSS region transcription start site region 83430
Gm3889 8 124160073 to 124160684 611 + pseudogene predicted gene 3889
D8Ski10 8 124190823 to 124191027 204 DNA segment DNA segment, Chr 8, Sloan-Kettering Institute 10
Gm42054 8 124196553 to 124206307 9754 + lncRNA gene predicted gene, 42054
Tssr80021 8 124197105 to 124197123 18 + TSS region transcription start site region 80021
Tssr80022 8 124197139 to 124197154 15 + TSS region transcription start site region 80022
Cpgi21266 8 124230931 to 124232589 1658 CpG island CpG island 21266
Tssr80023 8 124231359 to 124231450 91 + TSS region transcription start site region 80023
Galnt2 8 124231394 to 124345722 114328 + protein coding gene polypeptide N-acetylgalactosaminyltransferase 2
Tssr80024 8 124231461 to 124231530 69 + TSS region transcription start site region 80024
Tssr80025 8 124271888 to 124271917 29 + TSS region transcription start site region 80025
Tssr83431 8 124273956 to 124273966 10 - TSS region transcription start site region 83431
Tssr83432 8 124274472 to 124274487 15 - TSS region transcription start site region 83432
Tssr80026 8 124274682 to 124274724 42 + TSS region transcription start site region 80026
1810008B01Rik 8 124305132 to 124306507 1375 - antisense lncRNA gene RIKEN cDNA 1810008B01 gene
Tssr80027 8 124318162 to 124318171 9 + TSS region transcription start site region 80027
Gm15775 8 124324778 to 124331795 7017 - antisense lncRNA gene predicted gene 15775
Tssr80028 8 124340566 to 124340569 3 + TSS region transcription start site region 80028