Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:123601026-123702736

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rn5s-ps1 8 123601570 to 123601680 110 - pseudogene 5S RNA, pseudogene 1
Gm24089 8 123601572 to 123601680 108 - rRNA gene predicted gene, 24089
n-R5s138 8 123603247 to 123603365 118 - rRNA gene nuclear encoded rRNA 5S 138
n-R5s139 8 123604948 to 123605066 118 - rRNA gene nuclear encoded rRNA 5S 139
Gm22109 8 123606613 to 123606731 118 - rRNA gene predicted gene, 22109
n-R5s141 8 123608320 to 123608438 118 - rRNA gene nuclear encoded rRNA 5S 141
n-R5s142 8 123610017 to 123610135 118 - rRNA gene nuclear encoded rRNA 5S 142
n-R5s143 8 123611715 to 123611833 118 - rRNA gene nuclear encoded rRNA 5S 143
n-R5s144 8 123613414 to 123613532 118 - rRNA gene nuclear encoded rRNA 5S 144
Gm25212 8 123615099 to 123615217 118 - rRNA gene predicted gene, 25212
n-R5s146 8 123616810 to 123616928 118 - rRNA gene nuclear encoded rRNA 5S 146
Gm22291 8 123618536 to 123618654 118 - rRNA gene predicted gene, 22291
Gm23284 8 123620241 to 123620359 118 - rRNA gene predicted gene, 23284
n-R5s149 8 123621928 to 123622046 118 - rRNA gene nuclear encoded rRNA 5S 149
Gm23647 8 123623637 to 123623745 108 - rRNA gene predicted gene, 23647
Cpgi21255 8 123628858 to 123629449 591 CpG island CpG island 21255
Gm19600 8 123631028 to 123644623 13595 + lncRNA gene predicted gene, 19600
Tssr79979 8 123631214 to 123631218 4 + TSS region transcription start site region 79979
Gm35930 8 123648292 to 123651835 3543 + lncRNA gene predicted gene, 35930
Tssr79980 8 123649740 to 123649777 37 + TSS region transcription start site region 79980
Gm35874 8 123651026 to 123652736 1710 - lncRNA gene predicted gene, 35874
Cpgi21256 8 123653226 to 123654618 1392 CpG island CpG island 21256
Tssr79981 8 123653791 to 123653805 14 + TSS region transcription start site region 79981
Tssr79982 8 123653807 to 123653818 11 + TSS region transcription start site region 79982
Tssr79983 8 123653823 to 123653834 11 + TSS region transcription start site region 79983
Tssr79984 8 123653841 to 123653877 36 + TSS region transcription start site region 79984
Tssr79985 8 123653903 to 123653908 5 + TSS region transcription start site region 79985
Rhou 8 123653929 to 123663880 9951 + protein coding gene ras homolog family member U
Tssr83373 8 123655323 to 123655324 1 - TSS region transcription start site region 83373
Tssr83374 8 123655565 to 123655578 13 - TSS region transcription start site region 83374
D8Ski14 8 123672380 to 123672583 203 DNA segment DNA segment, Chr 8, Sloan-Kettering Institute 14
Gm35995 8 123694559 to 123696771 2212 - lncRNA gene predicted gene, 35995