Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:123220105-123250117

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spata33 8 123212832 to 123222046 9214 + protein coding gene spermatogenesis associated 33
Cpgi21243 8 123224428 to 123225427 999 CpG island CpG island 21243
Tssr79932 8 123224833 to 123224875 42 + TSS region transcription start site region 79932
Cdk10 8 123224842 to 123232250 7408 + protein coding gene cyclin-dependent kinase 10
Gm45842 8 123230799 to 123242160 11361 + antisense lncRNA gene predicted gene 45842
Spata2l 8 123232255 to 123236247 3992 - protein coding gene spermatogenesis associated 2-like
Tssr79933 8 123235064 to 123235072 8 + TSS region transcription start site region 79933
Tssr79934 8 123235086 to 123235096 10 + TSS region transcription start site region 79934
4933417D19Rik 8 123235091 to 123242359 7268 + antisense lncRNA gene RIKEN cDNA 4933417D19 gene
Tssr79935 8 123235105 to 123235117 12 + TSS region transcription start site region 79935
Cpgi21244 8 123235277 to 123236461 1184 CpG island CpG island 21244
Tssr83341 8 123236166 to 123236195 29 - TSS region transcription start site region 83341
Tssr83342 8 123236198 to 123236237 39 - TSS region transcription start site region 83342
Vps9d1 8 123242356 to 123254222 11866 - protein coding gene VPS9 domain containing 1