Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:123199842-123257250

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dpep1 8 123186242 to 123201812 15570 + protein coding gene dipeptidase 1
Chmp1a 8 123204264 to 123212763 8499 - protein coding gene charged multivesicular body protein 1A
Tssr79926 8 123206539 to 123206540 1 + TSS region transcription start site region 79926
Rps12-ps9 8 123206623 to 123207021 398 + pseudogene ribosomal protein S12, pseudogene 9
Cpgi21242 8 123212245 to 123213407 1162 CpG island CpG island 21242
Tssr83339 8 123212742 to 123212779 37 - TSS region transcription start site region 83339
Tssr83340 8 123212780 to 123212789 9 - TSS region transcription start site region 83340
Tssr79927 8 123212826 to 123212848 22 + TSS region transcription start site region 79927
Spata33 8 123212832 to 123222046 9214 + protein coding gene spermatogenesis associated 33
Tssr79928 8 123212851 to 123212856 5 + TSS region transcription start site region 79928
Tssr79929 8 123212857 to 123212911 54 + TSS region transcription start site region 79929
Tssr79930 8 123212913 to 123212924 11 + TSS region transcription start site region 79930
Tssr79931 8 123213014 to 123213032 18 + TSS region transcription start site region 79931
Cpgi21243 8 123224428 to 123225427 999 CpG island CpG island 21243
Tssr79932 8 123224833 to 123224875 42 + TSS region transcription start site region 79932
Cdk10 8 123224842 to 123232250 7408 + protein coding gene cyclin-dependent kinase 10
Gm45842 8 123230799 to 123242160 11361 + antisense lncRNA gene predicted gene 45842
Spata2l 8 123232255 to 123236247 3992 - protein coding gene spermatogenesis associated 2-like
Tssr79933 8 123235064 to 123235072 8 + TSS region transcription start site region 79933
Tssr79934 8 123235086 to 123235096 10 + TSS region transcription start site region 79934
4933417D19Rik 8 123235091 to 123242359 7268 + antisense lncRNA gene RIKEN cDNA 4933417D19 gene
Tssr79935 8 123235105 to 123235117 12 + TSS region transcription start site region 79935
Cpgi21244 8 123235277 to 123236461 1184 CpG island CpG island 21244
Tssr83341 8 123236166 to 123236195 29 - TSS region transcription start site region 83341
Tssr83342 8 123236198 to 123236237 39 - TSS region transcription start site region 83342
Vps9d1 8 123242356 to 123254222 11866 - protein coding gene VPS9 domain containing 1
Cpgi21245 8 123253431 to 123255269 1838 CpG island CpG island 21245
Tssr83343 8 123254086 to 123254123 37 - TSS region transcription start site region 83343
Tssr83344 8 123254147 to 123254168 21 - TSS region transcription start site region 83344
Tssr83345 8 123254169 to 123254197 28 - TSS region transcription start site region 83345
Zfp276 8 123254195 to 123269745 15550 + protein coding gene zinc finger protein (C2H2 type) 276
Tssr79936 8 123254231 to 123254278 47 + TSS region transcription start site region 79936
Tssr79937 8 123254292 to 123254317 25 + TSS region transcription start site region 79937
Tssr2724 8 123254319 to 123254330 11 + TSS region transcription start site region 2724