Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:123025073-123106104

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ankrd11 8 122883822 to 123042277 158455 - protein coding gene ankyrin repeat domain 11
Tssr83327 8 123025432 to 123025434 2 - TSS region transcription start site region 83327
Tssr83328 8 123028986 to 123028990 4 - TSS region transcription start site region 83328
Tssr83329 8 123032380 to 123032384 4 - TSS region transcription start site region 83329
Tssr83330 8 123032750 to 123032751 1 - TSS region transcription start site region 83330
Cpgi21237 8 123040992 to 123043205 2213 CpG island CpG island 21237
Tssr83331 8 123041046 to 123041053 7 - TSS region transcription start site region 83331
Tssr79905 8 123041373 to 123041389 16 + TSS region transcription start site region 79905
Tssr2722 8 123042090 to 123042095 5 - TSS region transcription start site region 2722
Tssr83332 8 123042232 to 123042243 11 - TSS region transcription start site region 83332
Tssr83333 8 123042245 to 123042270 25 - TSS region transcription start site region 83333
Tssr83334 8 123042271 to 123042302 31 - TSS region transcription start site region 83334
Tssr79906 8 123042414 to 123042436 22 + TSS region transcription start site region 79906
Tssr79907 8 123042559 to 123042654 95 + TSS region transcription start site region 79907
2810013P06Rik 8 123042575 to 123044602 2027 + bidirectional promoter lncRNA gene RIKEN cDNA 2810013P06 gene
Tssr79908 8 123042663 to 123042672 9 + TSS region transcription start site region 79908
Tssr79909 8 123062952 to 123062974 22 + TSS region transcription start site region 79909
Gm35677 8 123063475 to 123065229 1754 - lncRNA gene predicted gene, 35677
Cpgi21238 8 123065073 to 123066104 1031 CpG island CpG island 21238
Tssr79910 8 123065490 to 123065529 39 + TSS region transcription start site region 79910
Spg7 8 123065508 to 123097751 32243 + protein coding gene SPG7, paraplegin matrix AAA peptidase subunit
Cpgi21239 8 123102134 to 123103602 1468 CpG island CpG island 21239
Tssr83335 8 123102260 to 123102280 20 - TSS region transcription start site region 83335
Tssr79911 8 123102344 to 123102351 7 + TSS region transcription start site region 79911
Rpl13 8 123102350 to 123105244 2894 + protein coding gene ribosomal protein L13
Tssr79912 8 123102359 to 123102420 61 + TSS region transcription start site region 79912
Tssr79913 8 123102431 to 123102454 23 + TSS region transcription start site region 79913
Snord68 8 123103058 to 123103105 47 + snoRNA gene small nucleolar RNA, C/D box 68
Mir7079 8 123104975 to 123105043 68 + miRNA gene microRNA 7079