Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:121578697-121672716

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fbxo31 8 121549440 to 121578806 29366 - protein coding gene F-box protein 31
Cpgi21195 8 121578014 to 121579394 1380 CpG island CpG island 21195
Tssr83231 8 121578755 to 121578817 62 - TSS region transcription start site region 83231
n-TMcat17 8 121579229 to 121579301 72 - tRNA gene nuclear encoded tRNA methionine 17 (anticodon CAT)
Tssr83232 8 121580507 to 121580541 34 - TSS region transcription start site region 83232
Tssr79814 8 121581734 to 121581736 2 + TSS region transcription start site region 79814
Gm17786 8 121581765 to 121582191 426 + pseudogene predicted gene, 17786
Cpgi21196 8 121585191 to 121585796 605 CpG island CpG island 21196
Cpgi21197 8 121590086 to 121591115 1029 CpG island CpG island 21197
Tssr83233 8 121590299 to 121590345 46 - TSS region transcription start site region 83233
Tssr79815 8 121590424 to 121590469 45 + TSS region transcription start site region 79815
Map1lc3b 8 121590468 to 121598047 7579 + protein coding gene microtubule-associated protein 1 light chain 3 beta
Tssr79816 8 121597779 to 121597794 15 + TSS region transcription start site region 79816
Zcchc14 8 121598697 to 121652716 54019 - protein coding gene zinc finger, CCHC domain containing 14
Tssr83234 8 121602254 to 121602258 4 - TSS region transcription start site region 83234
2600002B07Rik 8 121616547 to 121617907 1360 unclassified gene RIKEN cDNA 2600002B07 gene
Cpgi21198 8 121648438 to 121648706 268 CpG island CpG island 21198
Cpgi21199 8 121651132 to 121653656 2524 CpG island CpG island 21199
Tssr83235 8 121652852 to 121652888 36 - TSS region transcription start site region 83235
Tssr83236 8 121652895 to 121652913 18 - TSS region transcription start site region 83236
Gm27030 8 121654054 to 121654517 463 + lincRNA gene predicted gene, 27030
Cpgi21200 8 121660799 to 121660995 196 CpG island CpG island 21200
Gm23299 8 121666628 to 121666706 78 - snoRNA gene predicted gene, 23299
Gm45833 8 121666814 to 121674088 7274 - lincRNA gene predicted gene 45833