Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:118666561-119506562

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdh13 8 118283733 to 119324921 1041188 + protein coding gene cadherin 13
D8Mit322 8 118719348 to 118719453 105 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 322
Gm22999 8 118726900 to 118726987 87 + snoRNA gene predicted gene, 22999
Tssr79662 8 118733384 to 118733388 4 + TSS region transcription start site region 79662
D8Mit275 8 118734610 to 118734807 197 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 275
Cpgi21111 8 118753918 to 118754074 156 CpG island CpG island 21111
Tssr79663 8 118799386 to 118799394 8 + TSS region transcription start site region 79663
Tssr79664 8 118891176 to 118891182 6 + TSS region transcription start site region 79664
D8Mit362 8 118899638 to 118899763 125 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 362
Tssr83115 8 118906604 to 118906606 2 - TSS region transcription start site region 83115
Tssr79665 8 118970389 to 118970393 4 + TSS region transcription start site region 79665
D8Mit168 8 118985838 to 118985973 135 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 168
Gm31893 8 119052306 to 119058195 5889 - lncRNA gene predicted gene, 31893
Tssr79666 8 119062044 to 119062058 14 + TSS region transcription start site region 79666
Tssr79667 8 119086561 to 119086562 1 + TSS region transcription start site region 79667
Tssr79668 8 119095002 to 119095032 30 + TSS region transcription start site region 79668
Tssr2700 8 119213901 to 119213907 6 + TSS region transcription start site region 2700
Tssr79669 8 119277368 to 119277392 24 + TSS region transcription start site region 79669
Tssr79670 8 119277396 to 119277428 32 + TSS region transcription start site region 79670
Tssr79671 8 119277429 to 119277440 11 + TSS region transcription start site region 79671
D8Mit187 8 119319605 to 119319885 280 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 187
Cpgi21112 8 119344133 to 119344969 836 CpG island CpG island 21112
Tssr79672 8 119344472 to 119344483 11 + TSS region transcription start site region 79672
Tssr79673 8 119344490 to 119344536 46 + TSS region transcription start site region 79673
Hsbp1 8 119344538 to 119348929 4391 + protein coding gene heat shock factor binding protein 1
Tssr79674 8 119344540 to 119344551 11 + TSS region transcription start site region 79674
Tssr79675 8 119344717 to 119344731 14 + TSS region transcription start site region 79675
Tssr79676 8 119344749 to 119344761 12 + TSS region transcription start site region 79676
Tssr79677 8 119344932 to 119344973 41 + TSS region transcription start site region 79677
Tssr79678 8 119345239 to 119345260 21 + TSS region transcription start site region 79678
Tssr79679 8 119345425 to 119345435 10 + TSS region transcription start site region 79679
Tssr79680 8 119345621 to 119345632 11 + TSS region transcription start site region 79680
Tssr79681 8 119348124 to 119348189 65 + TSS region transcription start site region 79681
D8Mit274 8 119359466 to 119359708 242 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 274
Gm45723 8 119384389 to 119386392 2003 + lincRNA gene predicted gene 45723
Cpgi21113 8 119394508 to 119395819 1311 CpG island CpG island 21113
Tssr79682 8 119394866 to 119394954 88 + TSS region transcription start site region 79682
Mlycd 8 119394878 to 119411102 16224 + protein coding gene malonyl-CoA decarboxylase
Tssr79683 8 119404582 to 119404595 13 + TSS region transcription start site region 79683
Gm46053 8 119406544 to 119407549 1005 - lncRNA gene predicted gene, 46053
D8Mit188 8 119408978 to 119409127 149 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 188
Gm32006 8 119415104 to 119429070 13966 - lncRNA gene predicted gene, 32006
Tssr2701 8 119415987 to 119415990 3 + TSS region transcription start site region 2701
Tssr83116 8 119416918 to 119416928 10 - TSS region transcription start site region 83116
Tssr79684 8 119417378 to 119417394 16 + TSS region transcription start site region 79684
Tssr83117 8 119417982 to 119417990 8 - TSS region transcription start site region 83117
Tssr79685 8 119418952 to 119418957 5 + TSS region transcription start site region 79685
Tssr79686 8 119418983 to 119418987 4 + TSS region transcription start site region 79686
Tssr79687 8 119419013 to 119419018 5 + TSS region transcription start site region 79687
Tssr2702 8 119419027 to 119419032 5 + TSS region transcription start site region 2702
Tssr79688 8 119419041 to 119419052 11 + TSS region transcription start site region 79688
Tssr2703 8 119423988 to 119424003 15 + TSS region transcription start site region 2703
Tssr83118 8 119424330 to 119424343 13 - TSS region transcription start site region 83118
Tssr83119 8 119424344 to 119424362 18 - TSS region transcription start site region 83119
Tssr79689 8 119424461 to 119424481 20 + TSS region transcription start site region 79689
Tssr83120 8 119424969 to 119425002 33 - TSS region transcription start site region 83120
Tssr79690 8 119425903 to 119425931 28 + TSS region transcription start site region 79690
Tssr79691 8 119425936 to 119425958 22 + TSS region transcription start site region 79691
Tssr83121 8 119426580 to 119426593 13 - TSS region transcription start site region 83121
Tssr83122 8 119428928 to 119428937 9 - TSS region transcription start site region 83122
Tssr83123 8 119428989 to 119429023 34 - TSS region transcription start site region 83123
Osgin1 8 119434135 to 119446256 12121 + protein coding gene oxidative stress induced growth inhibitor 1
Tssr79692 8 119437092 to 119437133 41 + TSS region transcription start site region 79692
Tssr79693 8 119437139 to 119437154 15 + TSS region transcription start site region 79693
Tssr79694 8 119441397 to 119441418 21 + TSS region transcription start site region 79694
Tssr79695 8 119442478 to 119442512 34 + TSS region transcription start site region 79695
Cpgi21114 8 119446310 to 119448117 1807 CpG island CpG island 21114
Necab2 8 119446719 to 119472640 25921 + protein coding gene N-terminal EF-hand calcium binding protein 2
Tssr79696 8 119446745 to 119446766 21 + TSS region transcription start site region 79696
Tssr79697 8 119446841 to 119446852 11 + TSS region transcription start site region 79697
Tssr79698 8 119446922 to 119446947 25 + TSS region transcription start site region 79698
Tssr79699 8 119447038 to 119447135 97 + TSS region transcription start site region 79699
Tssr79700 8 119465276 to 119465305 29 + TSS region transcription start site region 79700
Tssr79701 8 119466432 to 119466450 18 + TSS region transcription start site region 79701
Slc38a8 8 119479602 to 119501698 22096 - protein coding gene solute carrier family 38, member 8
Tssr83124 8 119501698 to 119501726 28 - TSS region transcription start site region 83124
Tssr83125 8 119501761 to 119501766 5 - TSS region transcription start site region 83125