MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:116068515-116527435

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D8Mit35	8	116101792 to 116101929	137		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 35
Im1	8	116101792 to 116101929	137		QTL	Immunoregulatory 1
Sluc9	8	116101792 to 116101929	137		QTL	susceptibility to lung cancer 9
Tssr79564	8	116126916 to 116126927	11	+	TSS region	transcription start site region 79564
4930422C21Rik	8	116181451 to 116187369	5918	-	lincRNA gene	RIKEN cDNA 4930422C21 gene
Gm31225	8	116190682 to 116192533	1851	+	lncRNA gene	predicted gene, 31225
Gm31278	8	116243515 to 116352435	108920	-	lncRNA gene	predicted gene, 31278
D8Mit89	8	116333216 to 116333346	130		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 89
1700018P08Rik	8	116357061 to 116359550	2489	+	lincRNA gene	RIKEN cDNA 1700018P08 gene
Tssr83062	8	116435720 to 116435732	12	-	TSS region	transcription start site region 83062
Tssr83063	8	116435763 to 116435774	11	-	TSS region	transcription start site region 83063
Cpgi21087	8	116480714 to 116480900	186		CpG island	CpG island 21087
Gm5357	8	116489186 to 116491109	1923	+	pseudogene	predicted gene 5357
Gm9058	8	116501698 to 116502572	874	+	pseudogene	predicted gene 9058
Tssr79565	8	116501700 to 116501705	5	+	TSS region	transcription start site region 79565
Tssr79566	8	116504966 to 116504967	1	+	TSS region	transcription start site region 79566
Tssr79567	8	116504973 to 116505023	50	+	TSS region	transcription start site region 79567
Dynlrb2	8	116505015 to 116515915	10900	+	protein coding gene	dynein light chain roadblock-type 2