MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:114150612-114429071

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Acigg9	8	102332498 to 114373932	12041434		QTL	anti COL7 IgG2b antibody 9
Tpnr6	8	110440000 to 114230000	3790000		QTL	thermal pain response 6
Nudt7	8	114133574 to 114154731	21157	+	protein coding gene	nudix (nucleoside diphosphate linked moiety X)-type motif 7
Tssr79535	8	114151678 to 114151694	16	+	TSS region	transcription start site region 79535
BC024137	8	114153406 to 114154938	1532		unclassified gene	cDNA sequence BC024137
Gm30272	8	114189017 to 114205589	16572	-	lncRNA gene	predicted gene, 30272
Cpgi21083	8	114205451 to 114206065	614		CpG island	CpG island 21083
Tssr79536	8	114205574 to 114205585	11	+	TSS region	transcription start site region 79536
Tssr79537	8	114205590 to 114205642	52	+	TSS region	transcription start site region 79537
Vat1l	8	114205612 to 114374071	168459	+	protein coding gene	vesicle amine transport protein 1 like
D8Mit317	8	114207620 to 114207789	169		DNA segment	DNA Segment, Chr 8, Massachusetts Institute of Technology 317
Tssr79538	8	114289365 to 114289388	23	+	TSS region	transcription start site region 79538
4933408N05Rik	8	114341161 to 114351478	10317	-	antisense lncRNA gene	RIKEN cDNA 4933408N05 gene
D8Mit271	8	114360122 to 114360217	95		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 271
Tssr79539	8	114417995 to 114418011	16	+	TSS region	transcription start site region 79539
Clec3a	8	114418086 to 114425846	7760	+	protein coding gene	C-type lectin domain family 3, member a
Gm30330	8	114423020 to 114435809	12789	-	lncRNA gene	predicted gene, 30330