Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:113457926-113886458

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi21079 8 113497600 to 113497776 176 CpG island CpG island 21079
4930571O06Rik 8 113517282 to 113550808 33526 + lncRNA gene RIKEN cDNA 4930571O06 gene
Gm25766 8 113519476 to 113519606 130 - snoRNA gene predicted gene, 25766
Gm24291 8 113528510 to 113528671 161 - snRNA gene predicted gene, 24291
Tssr82993 8 113528672 to 113528673 1 - TSS region transcription start site region 82993
Gm46064 8 113563320 to 113573617 10297 - pseudogene predicted gene, 46064
Tssr79521 8 113572681 to 113572685 4 + TSS region transcription start site region 79521
Gm18395 8 113589042 to 113591133 2091 + pseudogene predicted gene, 18395
4921521C08Rik 8 113633933 to 113635779 1846 unclassified gene RIKEN cDNA 4921521C08 gene
Cpgi21080 8 113634908 to 113636270 1362 CpG island CpG island 21080
Tssr79522 8 113635550 to 113635597 47 + TSS region transcription start site region 79522
Mon1b 8 113635587 to 113645179 9592 + protein coding gene MON1 homolog B, secretory traffciking associated
Tssr79523 8 113635619 to 113635630 11 + TSS region transcription start site region 79523
Tssr79524 8 113635787 to 113635842 55 + TSS region transcription start site region 79524
Tssr79525 8 113635848 to 113635862 14 + TSS region transcription start site region 79525
Tssr79526 8 113638728 to 113638741 13 + TSS region transcription start site region 79526
Tssr79527 8 113642496 to 113642511 15 + TSS region transcription start site region 79527
Tssr79528 8 113643178 to 113643197 19 + TSS region transcription start site region 79528
Tssr79529 8 113643206 to 113643231 25 + TSS region transcription start site region 79529
Syce1l 8 113643213 to 113655533 12320 + protein coding gene synaptonemal complex central element protein 1 like
Tssr79530 8 113644154 to 113644159 5 + TSS region transcription start site region 79530
Gm45789 8 113647900 to 113648263 363 - pseudogene predicted gene 45789
Gm30052 8 113667926 to 113676458 8532 - lincRNA gene predicted gene, 30052
Adamts18 8 113697126 to 113848738 151612 - protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
Mrdq3 8 113712788 to 125329141 11616353 QTL modifier of retinal degeneration QTL 3
Tssr82994 8 113839888 to 113839892 4 - TSS region transcription start site region 82994
Tssr82995 8 113843839 to 113843845 6 - TSS region transcription start site region 82995
Tssr82996 8 113846119 to 113846125 6 - TSS region transcription start site region 82996
Cpgi21081 8 113847946 to 113849180 1234 CpG island CpG island 21081
Tssr82997 8 113848728 to 113848774 46 - TSS region transcription start site region 82997
Tssr82998 8 113848851 to 113848870 19 - TSS region transcription start site region 82998
Tssr82999 8 113854885 to 113854894 9 - TSS region transcription start site region 82999
Tssr83000 8 113854917 to 113854924 7 - TSS region transcription start site region 83000
Tssr83001 8 113854933 to 113854942 9 - TSS region transcription start site region 83001
Tssr83002 8 113854948 to 113854955 7 - TSS region transcription start site region 83002
D8Mit318 8 113856281 to 113856404 123 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 318