Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:11328668-11468681

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col4a2 8 11312805 to 11449287 136482 + protein coding gene collagen, type IV, alpha 2
Gm46030 8 11321303 to 11351695 30392 - lncRNA gene predicted gene, 46030
Tssr76199 8 11336213 to 11336224 11 + TSS region transcription start site region 76199
Tssr76200 8 11352046 to 11352061 15 + TSS region transcription start site region 76200
Tssr80380 8 11354301 to 11354323 22 - TSS region transcription start site region 80380
Tssr76201 8 11354318 to 11354330 12 + TSS region transcription start site region 76201
Tssr76202 8 11398668 to 11398681 13 + TSS region transcription start site region 76202
Tssr76203 8 11398757 to 11398768 11 + TSS region transcription start site region 76203
Gm15419 8 11399186 to 11417892 18706 - antisense lncRNA gene predicted gene 15419
Tssr76204 8 11406821 to 11406825 4 + TSS region transcription start site region 76204
Tssr2487 8 11408104 to 11408115 11 + TSS region transcription start site region 2487
Tssr2488 8 11423562 to 11423564 2 + TSS region transcription start site region 2488
D8Mit218.2 8 11428855 to 11429006 151 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 218.2
D8Mit218 8 11428984 to 11429076 92 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 218
Tssr76205 8 11431090 to 11431101 11 + TSS region transcription start site region 76205
Tssr76206 8 11448154 to 11448168 14 + TSS region transcription start site region 76206
Tssr76207 8 11448495 to 11448557 62 + TSS region transcription start site region 76207
Tssr76208 8 11448969 to 11449001 32 + TSS region transcription start site region 76208
Tssr76209 8 11449034 to 11449045 11 + TSS region transcription start site region 76209
Rab20 8 11453513 to 11478499 24986 - protein coding gene RAB20, member RAS oncogene family
Tssr80381 8 11454924 to 11454934 10 - TSS region transcription start site region 80381
D8Mit217 8 11455083 to 11455257 174 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 217
Gm20100 8 11457471 to 11459742 2271 - unclassified gene predicted gene, 20100
Tssr76210 8 11458498 to 11458521 23 + TSS region transcription start site region 76210
Tssr76211 8 11458522 to 11458544 22 + TSS region transcription start site region 76211
Tssr76212 8 11461212 to 11461223 11 + TSS region transcription start site region 76212
Tssr76213 8 11461228 to 11461244 16 + TSS region transcription start site region 76213
Tssr76214 8 11463969 to 11463982 13 + TSS region transcription start site region 76214
Tssr76215 8 11464602 to 11464631 29 + TSS region transcription start site region 76215