Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:111980814-112080845

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adat1 8 111966908 to 111992302 25394 - protein coding gene adenosine deaminase, tRNA-specific 1
C88045 8 111977510 to 111981932 4422 unclassified gene expressed sequence C88045
Cpgi21075 8 111991861 to 111992444 583 CpG island CpG island 21075
Tssr82986 8 111992258 to 111992295 37 - TSS region transcription start site region 82986
Kars 8 111993443 to 112011323 17880 - protein coding gene lysyl-tRNA synthetase
Cpgi21076 8 112011096 to 112012416 1320 CpG island CpG island 21076
Tssr82987 8 112011271 to 112011296 25 - TSS region transcription start site region 82987
Tssr82988 8 112011299 to 112011310 11 - TSS region transcription start site region 82988
Tssr82989 8 112011320 to 112011372 52 - TSS region transcription start site region 82989
Tssr79512 8 112011365 to 112011388 23 + TSS region transcription start site region 79512
Tssr79513 8 112011392 to 112011447 55 + TSS region transcription start site region 79513
Terf2ip 8 112011398 to 112020528 9130 + protein coding gene telomeric repeat binding factor 2, interacting protein
Tssr79514 8 112011453 to 112011467 14 + TSS region transcription start site region 79514
Gm6793 8 112013433 to 112015036 1603 - pseudogene predicted gene 6793
Tssr79515 8 112018703 to 112018722 19 + TSS region transcription start site region 79515
Tssr79516 8 112018842 to 112018868 26 + TSS region transcription start site region 79516
Gm9564 8 112024933 to 112027351 2418 - protein coding gene predicted gene 9564
Tssr82990 8 112030814 to 112030845 31 - TSS region transcription start site region 82990
Tssr82991 8 112030875 to 112030914 39 - TSS region transcription start site region 82991
Tssr82992 8 112032341 to 112032359 18 - TSS region transcription start site region 82992
Gm36671 8 112061572 to 112063676 2104 + lncRNA gene predicted gene, 36671
Gm22827 8 112062505 to 112062611 106 + snRNA gene predicted gene, 22827