MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:110936335-110976360

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm26816	8	110863229 to 110940314	77085	-	lincRNA gene	predicted gene, 26816
St3gal2	8	110919922 to 110972480	52558	+	protein coding gene	ST3 beta-galactoside alpha-2,3-sialyltransferase 2
Gm46052	8	110936187 to 110939366	3179	-	lncRNA gene	predicted gene, 46052
Tssr79444	8	110940909 to 110940926	17	+	TSS region	transcription start site region 79444
Tssr79445	8	110940931 to 110940948	17	+	TSS region	transcription start site region 79445
Tssr79446	8	110940951 to 110940975	24	+	TSS region	transcription start site region 79446
Tssr79447	8	110940980 to 110940981	1	+	TSS region	transcription start site region 79447
Gm39251	8	110942300 to 110949609	7309	-	lncRNA gene	predicted gene, 39251
Tssr79448	8	110956335 to 110956360	25	+	TSS region	transcription start site region 79448
Cpgi21046	8	110957586 to 110957943	357		CpG island	CpG island 21046
Tssr79449	8	110957727 to 110957753	26	+	TSS region	transcription start site region 79449
Tssr79450	8	110957761 to 110957774	13	+	TSS region	transcription start site region 79450
Tssr79451	8	110961168 to 110961171	3	+	TSS region	transcription start site region 79451
Cpgi21047	8	110962175 to 110962418	243		CpG island	CpG island 21047
Tssr2687	8	110962848 to 110962851	3	+	TSS region	transcription start site region 2687
Cpgi21048	8	110969981 to 110970462	481		CpG island	CpG island 21048
Ddx19a	8	110974996 to 110997800	22804	-	protein coding gene	DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a