Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:110924996-111047800

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26816 8 110863229 to 110940314 77085 - lincRNA gene predicted gene, 26816
St3gal2 8 110919922 to 110972480 52558 + protein coding gene ST3 beta-galactoside alpha-2,3-sialyltransferase 2
Gm46052 8 110936187 to 110939366 3179 - lncRNA gene predicted gene, 46052
Tssr79444 8 110940909 to 110940926 17 + TSS region transcription start site region 79444
Tssr79445 8 110940931 to 110940948 17 + TSS region transcription start site region 79445
Tssr79446 8 110940951 to 110940975 24 + TSS region transcription start site region 79446
Tssr79447 8 110940980 to 110940981 1 + TSS region transcription start site region 79447
Gm39251 8 110942300 to 110949609 7309 - lncRNA gene predicted gene, 39251
Tssr79448 8 110956335 to 110956360 25 + TSS region transcription start site region 79448
Cpgi21046 8 110957586 to 110957943 357 CpG island CpG island 21046
Tssr79449 8 110957727 to 110957753 26 + TSS region transcription start site region 79449
Tssr79450 8 110957761 to 110957774 13 + TSS region transcription start site region 79450
Tssr79451 8 110961168 to 110961171 3 + TSS region transcription start site region 79451
Cpgi21047 8 110962175 to 110962418 243 CpG island CpG island 21047
Tssr2687 8 110962848 to 110962851 3 + TSS region transcription start site region 2687
Cpgi21048 8 110969981 to 110970462 481 CpG island CpG island 21048
Ddx19a 8 110974996 to 110997800 22804 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a
Cpgi21049 8 110997465 to 110998057 592 CpG island CpG island 21049
Tssr82892 8 110997764 to 110997839 75 - TSS region transcription start site region 82892
Tssr79452 8 110997869 to 110997901 32 + TSS region transcription start site region 79452
Ddx19b 8 111003188 to 111031751 28563 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
Mir3473d 8 111016450 to 111016530 80 - miRNA gene microRNA 3473d
Cpgi21050 8 111027450 to 111028030 580 CpG island CpG island 21050
Tssr82893 8 111027670 to 111027721 51 - TSS region transcription start site region 82893
Tssr82894 8 111027724 to 111027745 21 - TSS region transcription start site region 82894
Tssr82895 8 111027752 to 111027791 39 - TSS region transcription start site region 82895
Tssr82896 8 111030915 to 111030918 3 - TSS region transcription start site region 82896
Cpgi21051 8 111031531 to 111031828 297 CpG island CpG island 21051
Tssr82897 8 111031712 to 111031747 35 - TSS region transcription start site region 82897
Aars 8 111033144 to 111057664 24520 + protein coding gene alanyl-tRNA synthetase
Cpgi21052 8 111033803 to 111034252 449 CpG island CpG island 21052
Tssr79453 8 111033861 to 111033886 25 + TSS region transcription start site region 79453
Tssr79454 8 111033890 to 111033932 42 + TSS region transcription start site region 79454
Tssr79455 8 111033937 to 111033949 12 + TSS region transcription start site region 79455
Tssr79456 8 111034098 to 111034165 67 + TSS region transcription start site region 79456
Tssr79457 8 111036885 to 111036899 14 + TSS region transcription start site region 79457
Tssr79458 8 111036902 to 111036912 10 + TSS region transcription start site region 79458
Gm24103 8 111041948 to 111042024 76 - miRNA gene predicted gene, 24103
Tssr79459 8 111043294 to 111043313 19 + TSS region transcription start site region 79459