Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:11016555-11217373

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9530052E02Rik 8 11007850 to 11054541 46691 + lncRNA gene RIKEN cDNA 9530052E02 gene
Tssr76188 8 11036227 to 11036239 12 + TSS region transcription start site region 76188
B830042I05Rik 8 11071046 to 11076881 5835 + lincRNA gene RIKEN cDNA B830042I05 gene
Tssr76189 8 11071465 to 11071479 14 + TSS region transcription start site region 76189
Tssr76190 8 11098965 to 11098983 18 + TSS region transcription start site region 76190
Gm44714 8 11116555 to 11117373 818 + lincRNA gene predicted gene 44714
Gm44717 8 11135641 to 11149246 13605 - lincRNA gene predicted gene 44717
Tssr76191 8 11175221 to 11175225 4 + TSS region transcription start site region 76191
Tssr80364 8 11183699 to 11183703 4 - TSS region transcription start site region 80364
Cpgi20081 8 11187661 to 11188458 797 CpG island CpG island 20081
Gm15418 8 11187755 to 11204503 16748 + antisense lncRNA gene predicted gene 15418
Col4a1 8 11198423 to 11312826 114403 - protein coding gene collagen, type IV, alpha 1
D0Nds29 8 11199100 to 11199218 118 DNA segment DNA segment, Nuffield Department of Surgery 29
Tssr80365 8 11199340 to 11199353 13 - TSS region transcription start site region 80365
Tssr80366 8 11199735 to 11199776 41 - TSS region transcription start site region 80366
Tssr80367 8 11201784 to 11201806 22 - TSS region transcription start site region 80367
Tssr80368 8 11202991 to 11203009 18 - TSS region transcription start site region 80368
Tssr80369 8 11211573 to 11211577 4 - TSS region transcription start site region 80369