Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:107169703-107369728

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cyb5b 8 107150661 to 107187470 36809 + protein coding gene cytochrome b5 type B
Tssr79292 8 107183099 to 107183103 4 + TSS region transcription start site region 79292
4930517G24Rik 8 107205122 to 107217659 12537 + lncRNA gene RIKEN cDNA 4930517G24 gene
Tssr79293 8 107205316 to 107205353 37 + TSS region transcription start site region 79293
Tssr79294 8 107205367 to 107205374 7 + TSS region transcription start site region 79294
D8Mit185 8 107211742 to 107211882 140 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 185
Rps18-ps3 8 107262793 to 107263248 455 - pseudogene ribosomal protein S18, pseudogene 3
Tssr82792 8 107269703 to 107269728 25 - TSS region transcription start site region 82792
Cpgi20989 8 107293027 to 107294494 1467 CpG island CpG island 20989
Tssr82793 8 107293201 to 107293204 3 - TSS region transcription start site region 82793
Tssr79295 8 107293463 to 107293483 20 + TSS region transcription start site region 79295
Nfat5 8 107293470 to 107379517 86047 + protein coding gene nuclear factor of activated T cells 5
Tssr79296 8 107293500 to 107293517 17 + TSS region transcription start site region 79296
Tssr79297 8 107294405 to 107294410 5 + TSS region transcription start site region 79297
3830408D07Rik 8 107309787 to 107310803 1016 unclassified gene RIKEN cDNA 3830408D07 gene
1110035E04Rik 8 107312676 to 107314036 1360 unclassified gene RIKEN cDNA 1110035E04 gene
Tssr79298 8 107324931 to 107324936 5 + TSS region transcription start site region 79298
Tssr79299 8 107334900 to 107334908 8 + TSS region transcription start site region 79299
C430050I21Rik 8 107335640 to 107336470 830 unclassified gene RIKEN cDNA C430050I21 gene
Tssr79300 8 107344435 to 107344438 3 + TSS region transcription start site region 79300
Tssr79301 8 107367107 to 107367118 11 + TSS region transcription start site region 79301
Tssr79302 8 107368064 to 107368098 34 + TSS region transcription start site region 79302
Tssr79303 8 107368195 to 107368206 11 + TSS region transcription start site region 79303
Tssr79304 8 107368293 to 107368305 12 + TSS region transcription start site region 79304
Tssr79305 8 107368543 to 107368589 46 + TSS region transcription start site region 79305
Tssr79306 8 107368777 to 107368791 14 + TSS region transcription start site region 79306
Tssr79307 8 107368796 to 107368830 34 + TSS region transcription start site region 79307