Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:105597736-105637752

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr79158 8 105602824 to 105602826 2 + TSS region transcription start site region 79158
Cpgi20939 8 105604667 to 105606026 1359 CpG island CpG island 20939
Tssr79159 8 105605022 to 105605040 18 + TSS region transcription start site region 79159
Tssr79160 8 105605041 to 105605056 15 + TSS region transcription start site region 79160
Tssr79161 8 105605220 to 105605306 86 + TSS region transcription start site region 79161
Ripor1 8 105605255 to 105622219 16964 + protein coding gene RHO family interacting cell polarization regulator 1
Cpgi20940 8 105606502 to 105606719 217 CpG island CpG island 20940
Tssr82673 8 105606682 to 105606693 11 - TSS region transcription start site region 82673
Tssr82674 8 105606698 to 105606710 12 - TSS region transcription start site region 82674
Cpgi20941 8 105613195 to 105613562 367 CpG island CpG island 20941
Tssr79162 8 105613226 to 105613243 17 + TSS region transcription start site region 79162
Tssr79163 8 105613246 to 105613266 20 + TSS region transcription start site region 79163
Cpgi20942 8 105613822 to 105614614 792 CpG island CpG island 20942
Mir1966 8 105615466 to 105615573 107 + miRNA gene microRNA 1966
Tssr79164 8 105617727 to 105617789 62 + TSS region transcription start site region 79164
Tssr82675 8 105617736 to 105617752 16 - TSS region transcription start site region 82675
Tssr79165 8 105617790 to 105617836 46 + TSS region transcription start site region 79165
Tssr79166 8 105617879 to 105617901 22 + TSS region transcription start site region 79166
Tssr82676 8 105623145 to 105623166 21 - TSS region transcription start site region 82676
Tssr79167 8 105623389 to 105623405 16 + TSS region transcription start site region 79167
Tssr79168 8 105623424 to 105623439 15 + TSS region transcription start site region 79168
Gm5914 8 105624336 to 105637474 13138 - lincRNA gene predicted gene 5914
Tssr82677 8 105629127 to 105629130 3 - TSS region transcription start site region 82677
Gm38384 8 105633750 to 105634871 1121 + unclassified gene predicted gene, 38384
Tssr82678 8 105634854 to 105634872 18 - TSS region transcription start site region 82678
Cpgi20943 8 105635677 to 105637904 2227 CpG island CpG island 20943
Tssr79169 8 105635781 to 105635802 21 + TSS region transcription start site region 79169
Tssr82679 8 105636154 to 105636177 23 - TSS region transcription start site region 82679
Tssr79170 8 105636488 to 105636499 11 + TSS region transcription start site region 79170
Tssr79171 8 105636509 to 105636589 80 + TSS region transcription start site region 79171
Ctcf 8 105636568 to 105682922 46354 + protein coding gene CCCTC-binding factor
Tssr79172 8 105636590 to 105636612 22 + TSS region transcription start site region 79172
Tssr79173 8 105636926 to 105636979 53 + TSS region transcription start site region 79173
Tssr82680 8 105637316 to 105637333 17 - TSS region transcription start site region 82680
Tssr82681 8 105637363 to 105637392 29 - TSS region transcription start site region 82681
Tssr82682 8 105637403 to 105637497 94 - TSS region transcription start site region 82682